Ricinus communis (castor bean): 112535160
Help
Entry
112535160 CDS
T01087
Name
(RefSeq) LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112535160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
112535160
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112535160
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112535160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
112535160
NCBI-ProteinID:
XP_048235770
LinkDB
All DBs
Position
1:5566352..5567295
Genome browser
AA seq
236 aa
AA seq
DB search
MVREGYLEELRKIDQSRYSFQVLSINADTTKLIQLGLTLSDENGNIGCVWQFNFSFCTET
XHDSIEFLKNSEIDFGRLNRHYILRKHQVLQLVCFHDLRHVVKLLTNNSLPTSLMHLTRM
IGYVFGQIVDIKHMVSLCEGLFNGEFGMQKLAKVMEVERVGMAHQAGSDSLLTSQLFAKI
KDTFQVEESSIWTIYMVFIQRMQITAATNSYSSQSTLAQDDIPFIHCHHRLFPICT
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggttagagagggatatttggaggagctgcgaaaaattgatcaatctcgttatagcttc
caggtgttgtccattaatgcggatactactaagttaattcaacttggcttgactttatct
gacgaaaacggaaatattggctgtgtatggcagttcaatttttctttctgtactgaaaca
nngcatgattctatcgagtttctgaagaattctgaaattgattttggaagactgaataga
cactacattttgcgcaaacatcaggttttgcaattggtatgttttcatgacttgcgtcat
gtggtcaagcttttaaccaacaactcactgcccacttcgcttatgcaccttactcgaatg
atcggttatgtttttggtcagattgttgatatcaaacatatggtcagcttatgtgaaggt
ttgtttaatggtgaatttggaatgcagaaactagcaaaggttatggaagttgaacgtgtt
ggtatggctcatcaagctggttcagatagtttattgaccagccaactttttgcaaagatt
aaggacacattccaggtcgaagaatccagtatttggaccatctatatggtattcatacaa
cgtatgcagatcacagcagcaactaattcctattcgtcacagtcgaccttggcccaagat
gatattccattcattcactgccaccaccggttgtttccaatatgcacctag
DBGET
integrated database retrieval system
