Ricinus communis (castor bean): 8258034
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Entry
8258034 CDS
T01087
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
8258034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8258034
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
8258034
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
8258034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
8258034
NCBI-ProteinID:
XP_048225831
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All DBs
Position
1:complement(24046716..24084754)
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AA seq
992 aa
AA seq
DB search
MLTGRESLVRVIGKRRRFLPNRHSLLSIPILQSFSENNKMEDEKNQLEISSHDWVLCPVC
GSRIRGQDSVINSHLDACLSSGRKRKLTQRTLLQLNFCSQSQTSSVVQDTVIDSEKFTAD
VDKNDSDPCELPSGTKPLTVETDVVSSTEKSVDGYGINCHIDPPSLPLKDEVPKCDPVTT
YDEILGATLETFIVGRRFSVEKELNLGERICLLRDPGNANDPNAIKVVLADSTLSKVLGF
LPRELAQYLAPLVEKYCLTFEGHVTSVPKRSLDAVPIQIMCSKVISHGDRDHSQIEAFTY
LWKNVLHVVESTKSYANSSTKYQQNFRLLIQEVLRSNPDLFIDDEKTFMESFLSLPDDSQ
RLFVRLYTRKGPWFRMSNISYPEISDSKHAVKGLSAAGYISSFEDAKELPNSDMEEILNL
LTVSELREITCMFRKNDTHYTRKHDIIAYIVSSYEDGSSLFLQTAIFDRTGMCIKISAKA
ESLIWRAERLFFLNGEQDLSTFLQVDLGIVKYPTYRCIISEHFYLTRDNLLAYEEAIEVA
QIMDESLEENNSELVLGCIKIADSRISSSTAKATQSMASESAAILLSCFSASWVYSKVVV
LGVSFFEHEHRYKDAINLLKRLLACFPCDGRRGYWTLRLSIDLEHIGCPNESLSIAEDGL
LDVSVRAGSKIALQRRVLRLGKPPRRWKAPSFSYSIRRKIKEVHIQGRPLNHETGKKSRF
YGEDGEQCGVEQLALQYYAGEGGGWNGVHSESGIWLTIFGLLMWDIIFSDVPNVFLNRFQ
EFDLEIKDKRGAENLAADHLSRLENPHLEELNEQAINDFFPDEHLCSMQTGPLDLETDGF
YLARKSLIESHLQKIHDGMAEEIVIKSWELHSGTSCRGVNWVRHSLSEVRAAVTCIRSPC
LASLCRHLSQDYRSWSSGMPDLFLWRFQGEYRGEAKLVEVKGPKDSLSEQQQAWLLLLMD
CGFSTEVCKPDFFGFLSEAKNGGSHHLRKLSI
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgttaactggacgagagagcttggttcgagtgattggaaaacgacgacgtttccttcct
aatcgccattctttgctttccattccgatactccagagtttctcagagaataataaaatg
gaagacgagaaaaatcagcttgaaatatcttctcatgactgggtattatgccctgtttgc
gggtctaggattcgcgggcaagactccgtaattaactctcatttggatgcatgcctgtct
agtggaagaaaacgaaaattgactcaacgaacccttcttcagttgaacttttgctcacaa
tcacaaacaagtagtgttgtacaggatactgttattgactcagagaaatttactgctgat
gttgacaaaaatgatagtgatccttgtgaattaccatcgggtacaaagcctttgactgtc
gaaactgatgttgttagttcaactgagaaatcagttgatgggtatgggatcaactgccac
attgatcctccttcattgcccctgaaagatgaagtgcccaaatgtgatccagtcactact
tatgatgaaatattgggcgcgactcttgagactttcattgttggccgtaggtttagtgtt
gagaaggaattaaatcttggggaaagaatctgtcttttgagagacccgggtaatgctaat
gatccaaatgctatcaaggttgttttggcagattcgactctcagtaaagtgcttggtttt
cttccccgagagttagctcaatatttggctcccttagttgagaagtactgtctaaccttt
gaggggcatgttacttctgttcccaaacgttcacttgatgctgttcccattcagattatg
tgttccaaagtgatatcacatggtgatagagaccacagtcaaattgaggcttttacatat
ttatggaaaaatgttctccatgtagttgaatctacaaagagttatgcaaatagttctaca
aaataccagcagaactttcgtttgttaattcaagaggttttgagaagcaatcctgacctt
ttcattgatgatgagaaaactttcatggaatcatttctatctctgccagatgacagtcag
aggctttttgttcgactttacacgcggaaaggaccatggttccggatgtctaatatttca
tacccagaaatttctgattctaagcatgcagtcaaggggctttctgcagcaggttatatt
agttcctttgaagatgcaaaagaactgccaaacagtgacatggaagagattttgaatttg
ctcactgtctctgaactgcgtgaaattacatgcatgttcaggaagaatgacactcattat
acaaggaagcacgatatcattgcatatattgtgtccagctatgaagatggatcaagctta
tttctacaaactgccatttttgatagaactggaatgtgtattaagatatctgcaaaagct
gaatcccttatttggcgtgctgagagacttttcttccttaatggagagcaggatctatca
acatttctacaagttgatttggggattgtcaagtatccaacctaccgatgcattatatca
gaacatttttacttgactcgagataatctgttagcttatgaagaggcgattgaagtggca
caaataatggatgagtctcttgaggaaaataatagtgaattggtattaggatgcataaag
atagctgactcccgaatatccagctctactgcaaaagcaactcaatcaatggcctctgaa
tcggcagctattcttctttcgtgcttttctgcatcctgggtatactcgaaagtggttgtt
ctgggagtttcattttttgaacatgagcataggtacaaagatgcaattaacttgctgaag
cgattgcttgcttgttttccttgtgatggaaggagaggttattggacattgagattgtct
atcgatttggagcacattggttgtcccaatgagagcctttcaattgccgaagatggttta
ttggatgtgtcggtacgtgctggttcaaaaatagcactgcagaggcgagttcttcgccta
gggaaacctccaaggcgttggaaagctcctagcttctcatactctattaggaggaagatc
aaggaggttcatattcaggggagacctttgaaccatgaaactggaaagaagagtaggttc
tatggggaagatggggagcagtgtggagttgagcagcttgctttgcagtattatgctggt
gaaggaggtgggtggaatggtgttcattctgagagtggcatttggttgaccatttttggg
cttcttatgtgggacattatattttctgatgtaccaaatgtcttcctcaacagatttcag
gaatttgacttggaaattaaggacaaacgaggagctgaaaatcttgcagcagaccatctt
tctcgattggagaacccgcacttggaggagcttaatgagcaagcgatcaatgacttcttt
ccggatgagcacttatgctcaatgcagactggtccattggacttggagactgatggcttc
tatctagcaagaaagagccttatagaatctcacttgcagaaaattcatgatggtatggct
gaggagattgtcattaaatcatgggaactgcattcgggaacatcttgtaggggagttaat
tgggtccgacattctctatctgaagttcgggctgctgttacctgcatcaggagcccttgt
ttggcctcactctgcaggcatctttctcaagattatcgtagttggtccagtggaatgcca
gatttattcctgtggcgcttccagggagaatacagaggtgaagccaagctcgttgaagtt
aaaggccctaaagatagtctctctgagcagcagcaagcatggctgttgctgttaatggat
tgtggattcagtacagaagtttgtaaacccgacttcttcggattcctgtctgaagccaag
aatggggggagtcatcatttgaggaagctaagtatttaa
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