KEGG   Ricinus communis (castor bean): 8258290
Entry
8258290           CDS       T01087                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03020  RNA polymerase
rcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8258290
  09124 Replication and repair
   03420 Nucleotide excision repair
    8258290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8258290
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8258290
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     8258290
  RNA polymerase III system
   RNA polymerase III
     8258290
  RNA polymerase I system
   RNA polymerase I
     8258290
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8258290
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 8258290
NCBI-ProteinID: XP_048229433
LinkDB
Position
4:complement(29901555..29903209)
AA seq 170 aa
MADDDYNDMDMGYEDEPPEPEIEVSSAIILMYIVTLLHYIKCLWIGMIWQEGAEEDVENN
NNEDVPGDPIETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGE
TDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
NT seq 513 nt   +upstreamnt  +downstreamnt
atggccgatgatgactacaacgatatggatatgggatatgaggatgagcctccagagcct
gagattgaagtaagtagtgctattatattgatgtacattgtaactcttttacattatatt
aaatgtctttggattggaatgatttggcaggaaggagcagaggaggatgttgagaacaat
aacaatgaagatgttcctggggatccaatcgaaactgaggataaagaagaacaggaagcc
gcggaacgacctcgtaagacatcaaaatatatgacaaaatatgagcgtgctagaattttg
ggaactcgtgctttgcagatcagcatgaatgctcctgtaatggttgagttggagggggag
acagatccacttgagattgctatgaaggaacttcgagagcgaaaaataccttttaccatc
cgtcgctacctccctgatggaagttacgaagactggggagtagatgaactgatagtggaa
gactcttggaagaggcaagtgggaggtgattaa

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