Ricinus communis (castor bean): 8258346
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Entry
8258346 CDS
T01087
Name
(RefSeq) PHAF1 protein At3g51130 isoform X1
KO
K27411
phagosome assembly factor 1
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8258346
Membrane trafficking [BR:
rcu04131
]
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Other autophagy associated proteins
Others
8258346
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Gene cluster
GFIT
Motif
Pfam:
PHAF1
FF
Motif
Other DBs
NCBI-GeneID:
8258346
NCBI-ProteinID:
XP_048230612
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Position
5:964531..969491
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AA seq
405 aa
AA seq
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MLQPQSHRPRRRCEGTAMGAIILDLRPGVGIGPFSLGMPICEAFAQIEQQPNIYDVVHVK
YYDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSTLATF
VAVYALFGPTFPGIYDKDKGVYTLFYPGLSFAFPIPSQYTDCCHDGEAELPLEFPDGTTP
VTCRVSIYDSSTDKKVGVGSLMDKASAPPLPAGSLYMEEVHVKLGEELCFSTGGQHIPFG
ASPQDVWTELGRPCGIHQKQTCAGWYTLIQVDQMVIHSALDPRPRTTLCGDYFYNYFTRG
LDILFDGQTHKIKKFILHTNYPGHADFNSYIKCNFVIQVNNSKHITASTKWDQVKEILGD
CGRAAIQTQGSTSNPFGSTFVYGYHNIAFEVMKNGYIATVTLFQS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagccccaatctcaccgtcctcgccgccgctgcgagggcacagctatgggcgca
atcatcctcgatctccgccctggtgtcggaatcggccctttctctctgggtatgcctata
tgcgaagcgtttgcccaaattgagcagcaacctaatatatacgacgtcgttcatgttaag
tactatgacgaggagcctcttaaacttgatattgttattagttttcctgatcatgggttt
catctccggtttgatccctggtcgcagagactgcggttgattgaaatttttgatgtcaaa
cggcttcaaatgcgctatgccacgtctcttattgggggaccatccactctagctaccttt
gtggctgtatatgctctttttggtccaacttttccaggcatttatgacaaagataaaggg
gtctacactctcttctacccaggcctgtcctttgcatttccaattcctagccaatataca
gattgctgccatgatggagaagcggaactgccattggagtttccagatggcactactcca
gtaacttgccgggtctctatatatgacagttctactgataaaaaagttggtgttggatcc
ttaatggataaggcttctgctcctccattacctgctggcagcctgtatatggaagaggtg
catgttaagcttggtgaggagttgtgtttttcgacagggggccagcatatccctttcggt
gcatcaccacaggatgtttggactgaattaggtcgtccttgtggaattcatcaaaagcag
acatgtgctggttggtacacattaatacaggtagaccaaatggtcattcactctgcctta
gaccctcgtccacggacaacactttgtggagattacttctataactacttcactcgtggt
ttggacatcttattcgacggacagactcataagatcaagaagttcattttacacacaaac
tatcctggtcatgcagattttaattcgtatataaagtgcaacttcgttattcaagtaaat
aactcgaaacatattacagcgagtacaaaatgggaccaagttaaggaaatccttggggac
tgtggccgagcagcgattcaaacacagggttctactagtaatccttttggatccacattt
gtatatggctaccataatattgcctttgaggtgatgaaaaatggttatattgcaactgta
actctcttccagtcatga
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