Ricinus communis (castor bean): 8258378
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Entry
8258378 CDS
T01087
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8258378
04121 Ubiquitin system [BR:
rcu04121
]
8258378
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8258378
Membrane trafficking [BR:
rcu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8258378
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8258378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Rad50_zn_hook
zf-HC5HC2H_2
zf-HC5HC2H
zf-RING_16
DUF7129
CxC4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
8258378
NCBI-ProteinID:
XP_002531557
UniProt:
B9SZY8
LinkDB
All DBs
Position
10:complement(4511555..4513388)
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AA seq
356 aa
AA seq
DB search
MAASIGSSSFWCYRCNRFIRVRVPSIQDSISCPDCGGGFIEEIGTPSHSPLHHHHRRFPN
NSDHRLRRSADRSPFNPVIVLRGPPAANSSNFELYYDDGAGSGLRPLPSSISEFLMGSGF
DRLLDQLTQLEINGVGGLEQSPASKTAIESMPVINIISDHVSMESHCAVCKEAFEINTEA
REMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVRNGSGSGMTSPEASEGLTIWRLPGG
GFAVGRFSGGRRAAERELPVVFTEVDGGFNNSNSNNNNNAGGAPRRISWAPSGRRSREGT
GGFGRAFRSFFSFFGRIGRRVSDESGFNRTRSRANSIVDRSSRRDTSLWVMHDNRW
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttctataggatcgtcgtctttctggtgctacagatgcaaccgctttatcaga
gttagggttccatcaattcaagattcaatctcttgtcccgattgcggcgggggatttata
gaagaaatcgggactccttctcactcccctcttcaccaccaccaccgtcgattccctaat
aattcggatcatagactccggcgcagcgccgatcgctctcctttcaaccccgtcatcgtc
ctccgtggacctccagccgcaaattccagcaacttcgagctttactatgacgacggcgct
ggctccggcctccgtcctttgccgtcgagtatttcggagttcttgatggggtcagggttt
gaccggcttcttgatcagttgactcaattggaaatcaacggcgtaggtggattggagcag
tcgcctgcttcaaaaacggcgattgaatctatgcctgtgattaatataatttcggatcac
gtctctatggaatctcattgtgcagtttgtaaagaagcatttgagattaacacagaggcg
cgggagatgccatgtaagcatatttatcactctgattgtatccttccttggttatcgttg
cgtaattcttgtccagtttgtcgacacgagttgcccacagacgtgcgaaatggcagtgga
agtgggatgacttcgccggaagcaagtgaggggttaaccatatggagactgccaggtgga
ggttttgctgttgggaggtttagtggaggaaggagagcggcggagagggagcttcctgta
gtgtttacggaggtagatggcgggtttaataatagtaacagtaataataataataatgct
ggtggggcgcccaggaggatttcatgggcgcccagtgggagaagatcaagagagggtact
ggtgggtttggtcgtgcttttcgcagtttcttttccttctttggaaggattggaaggagg
gttagtgatgaatccggtttcaatcggacgagaagtagagcgaattctattgtggacagg
tcttcaagaagggatacttctctttgggtcatgcatgataacagatggtga
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