Ricinus communis (castor bean): 8258401
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Entry
8258401 CDS
T01087
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8258401
04121 Ubiquitin system [BR:
rcu04121
]
8258401
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8258401
Membrane trafficking [BR:
rcu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8258401
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8258401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
DUF7573
DUF8106
zf-HC5HC2H_2
Zn_ribbon_FGT1_2
Rad50_zn_hook
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
8258401
NCBI-ProteinID:
XP_015582334
LinkDB
All DBs
Position
6:23128590..23130427
Genome browser
AA seq
390 aa
AA seq
DB search
MSSPPTTPYWCYRCSRFVQASWRRQEQEQEEEITCPDCASGFLEQLEIQENAAAAADAGR
RFHSPSASSAAMLMVGTLPAADNNSLRRTRRNAGDRSPINPVILLRGGGGGESDSGLELY
YDDGSGSGLIPLPPSMREFLLGSGFDRLLDQIEINGLVRYEQPPASKSAIESMPTVIINE
MHTSTESHCAVCKEAFELDSEAREMPCKHIYHNECILPWLSIRNSCPVCRHELPADGDVN
EENHNNDNNSNEAAVGLTIWRLPGGGYAVGRFSDQLPVVYTEMDGGFNSGGLPRRISWGP
RGDGGGGGRGGVGGGGGGGGGAWFGLGRALRHWFACFGGGGGGVASNSDSRIRRRRRSRS
VSVSNNNVSSTSSRRRRVWDVEISDGRTRS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccacctacgacgccgtattggtgctacaggtgcagccgttttgttcaagca
tcatggaggagacaagaacaagaacaagaagaagaaataacttgcccagattgtgcatct
ggatttcttgagcaactcgaaattcaagaaaacgcagccgccgccgcagatgctgggcgg
agattccattctccatctgcttcttccgctgctatgttgatggtaggtacccttccagct
gcagataataactctcttcgtagaacacgaagaaacgccggtgaccgctctccgatcaac
ccggtaatcctccttcgcggaggaggaggaggagaatccgatagtggtttggagttatat
tacgatgatggaagtgggtccgggttaattccattgccgccgagtatgagggagtttttg
ttagggtctgggttcgatagattattagatcaaatagagataaatgggttagttagatac
gagcagccgccagcatcgaaatcagcgattgaatcgatgccgactgttattataaatgaa
atgcatacatcaacggaatcacactgcgcggtgtgtaaagaagcgtttgaattggactca
gaagcgagagaaatgccatgtaagcatatttatcataatgagtgtatacttccatggctt
tcgattcgaaactcttgtcctgtttgccgacatgagttacctgctgatggtgatgtaaat
gaagagaatcacaacaatgataataatagcaatgaggcggcggttggattgactatttgg
aggttaccgggaggtgggtatgcggtggggagatttagcgaccaattgcctgtggtttat
acagaaatggatggtgggtttaatagtgggggtttgcctaggaggatatcctggggaccg
agaggtgatggcggtggtggaggtagagggggagtaggtggcggcggcggcggtggtggt
ggtgcttggtttggtttgggtagagctttgaggcattggtttgcttgttttggtggcggt
ggcggtggagttgcttcaaattctgattcaagaattcgtcgtcgtcgtcggagtaggtct
gtttcggtttctaataacaatgtttcttctacttcatcgagaagaagaagggtttgggat
gttgagattagtgatggaagaacgagaagttga
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