KEGG   Ricinus communis (castor bean): 8258552
Entry
8258552           CDS       T01087                                 
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5 isoform X1
  KO
K15264  25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rcu03009]
    8258552
Enzymes [BR:rcu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.311  25S rRNA (cytosine2278-C5)-methyltransferase
     8258552
Ribosome biogenesis [BR:rcu03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   8258552
SSDB
Motif
Pfam: Methyltr_RsmB-F NSUN5_N NSUN5_fdxn-like PCMT FtsJ Methyltransf_31 Ubie_methyltran ASPP2-like_RA
Other DBs
NCBI-GeneID: 8258552
NCBI-ProteinID: XP_015572974
LinkDB
Position
3:complement(29922975..29927120)
AA seq 499 aa
MGKKKNMLYTKPPSGAAGKSETRQLTRPERSGFYARREAANVLKRVLQGHAQRRATGSIK
SLVYSPSVRNKRATFALVCQTLKHLPVIKDVLESAGALNTHSKLQKKEELMYIVAYDILF
GQEIPLVVGDVEKFLLRRKNDLQRALAKVLVRKKAKTIDDLLALYRPPDVSKPCYVRVNT
LKSDVDSALLELGRQFTVQKDDMVPNLFVLPPNSDLHNHPLVLDGSIFVQGKASSMVAVA
LDPKPGWEVLDACSAPGNKTVHVAALMRGKGRIIACELNKDRIKRLEDTVRLSGAANIEV
RHCDFLNLNPRDSPFSKIRAILLDPSCSGSGTAAQRLDHLLPSHATDPNNMERLKKLAAF
QKKALAHALSFPAVERVVYSTCSINQTENEDVIISILPIAASHGFQLVTPFPQWHRRGLS
VFEGSEHLLRTDPVEDKEGFFIALFVKKGTVDESGKLPKNVPVSLATEKYKLKRKSHVNR
KKLLMPLLFNRVSKFWLLN
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgggcaagaagaagaatatgttatatactaaaccaccatcaggagccgccgggaaatct
gagacccggcagctaaccagacccgagaggtcaggcttttatgcgagaagagaagctgca
aacgttttaaaaagagttcttcaaggccacgctcaacgtcgagctactggctcaatcaaa
tccctcgtttatagtccttctgttaggaacaaaagggctacttttgcccttgtttgccaa
accctaaagcatttacctgttattaaggatgtattggagtctgctggtgcactcaatacc
cactctaagttgcagaaaaaagaggaactgatgtacatagtcgcatatgacattctattt
ggtcaggaaatcccattggttgttggtgatgtcgagaaatttctcttgcgccggaaaaat
gatcttcagagagctctagcaaaggttttagtaaggaagaaagcgaagaccattgatgat
ttgcttgctctttatcgaccccctgatgtctcaaaaccttgttacgttcgtgtgaatact
ctaaaatcagatgttgattctgctttacttgaactaggaagacaattcacggtacagaag
gatgacatggtacctaacctgtttgtactgcctcccaacagtgatctacacaatcatcct
ctggttttggatggtagcatctttgtccagggaaaggcaagttcaatggttgcagtagcc
cttgatcctaaacctggttgggaggttcttgatgcatgttcagctccaggaaacaaaact
gtccatgttgctgcactcatgagaggaaagggtagaattatagcatgtgaattgaataag
gacaggattaagcgtctagaagacactgtcagactctctggtgccgctaacattgaagtt
cgtcattgtgatttcttgaacttaaatccaagagacagtcctttctccaagatccgtgct
attcttttagatccttcttgttctggatccgggactgctgctcagagattagaccattta
ctcccgtctcatgctactgatcccaataatatggaaagactgaagaagcttgcggctttt
caaaagaaggctctggcccatgcattatcttttccagcagttgaaagagtagtttacagc
acatgctctatcaaccaaactgaaaatgaagatgtcattatatcaatcctacctattgct
gcatcccatgggtttcagctggttacgccctttcctcagtggcatcggcgcggactctct
gtttttgagggctctgagcatttacttagaacagatccagttgaggacaaagaaggcttc
ttcattgctctctttgtcaagaaaggcactgttgatgagtcggggaaactacccaaaaat
gttcctgtctctctggcaactgaaaaatataagcttaaaaggaaaagccatgtgaatagg
aaaaaactcttgatgcctctactctttaatagagtatccaaattttggttgcttaactga

DBGET integrated database retrieval system