Ricinus communis (castor bean): 8258571
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Entry
8258571 CDS
T01087
Name
(RefSeq) peroxisome biogenesis factor 10 isoform X1
KO
K13346
peroxin-10
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8258571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8258571
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
8258571
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
zf-RING_6
zf-RING_10
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
8258571
NCBI-ProteinID:
XP_015572873
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Position
3:29829483..29833885
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AA seq
409 aa
AA seq
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MNTGSRETKLKVGFEGADMGITRNTESGSGSEGVQSAANNELRRFPPAAQPEIMRAAEKD
DQYASFVYDACRDAFRHLFGTRLAVAYQSETKLLGQMLYYVLTTGSGQQTLGEEYCDITQ
VSGPHGLPPTPARRALFILYQTAVPYMAERISSRVASRGITLADSIPDEPYTNTATESRG
IQSSVMVDLPSTSGSGASIVTRLRQNFSGLWLTAVRRWPTVLPVAREFLQLILRTNLMFF
YFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVFLLIQLCVIAAEGLRRSNLSSLAS
SVHQTSLEPHQSSGRGLPVLNEEGNLIATEAGRGSWVSDSTSTSESSGVSGASKCTLCLS
NRQYPTATACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLYHSDF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagggagtagagaaacgaagctgaaagttggttttgaaggagcggatatgggg
attacaaggaacacggaatcgggttcaggcagtgagggtgtacaatcggctgctaacaat
gaactgcgacggtttcctccggcagctcagccggagattatgagagcagcagagaaagac
gatcaatacgcgtcttttgtgtacgatgcttgtcgcgacgcttttcgtcacctatttggt
acaagactggctgttgcttatcagagtgagacaaagcttcttggacagatgctttattat
gtactaacaacaggttcaggccaacaaaccctcggagaagagtactgtgacattactcag
gtttccggtccacatggccttcctccaacaccagcaaggcgtgctcttttcattttatat
cagactgctgttccttacatggctgaaagaattagctcaagagttgcttctcgtggcatc
actcttgccgattccatacctgatgagccatacaccaacactgctactgagagccgtgga
attcaatcttctgtaatggttgaccttccatccacctctggatcaggcgcttcaatagta
acgaggttgaggcagaattttagtggcctatggttaactgcagttcggagatggcctacg
gtgcttcctgtggctcgtgaatttttacaattgattcttcgaacaaacctcatgtttttc
tattttgaagggctatattatcatatatcgaaacgtgcagctggcattcgttatgttttc
attggaaagccctcaaatcaaaggcctagataccaaatactaggagttttccttctaatt
cagctctgtgtcattgcggctgaaggtttacggcgaagcaatttatcttctcttgcaagt
tcagttcatcagacttccttggagcctcatcaaagttcaggacgaggtttgcctgtctta
aatgaagaaggtaatttgatagctacagaagctggcagggggagttgggtatcagattcc
acatcaacttcagagtcgtctggagtaagtggggcaagcaaatgcacactctgtttgagt
aatcggcaatatccaactgcaacagcctgtggtcatgttttttgctggaattgcataatg
gaatggtgcaacgaaaagcccgaatgccctctctgccggacccctataactcattcaagc
ctagtttgtttataccattcagatttctag
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