Ricinus communis (castor bean): 8258607 Help Entry 8258607           CDS       T01087                                  Name (RefSeq) endoribonuclease Dicer homolog 3   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism rcu  Ricinus communis (castor bean) Brite KEGG Orthology (KO) [BR:rcu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:rcu03036]     8258607 Chromosome and associated proteins [BR:rcu03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     8258607    microRNA pathway     RISC loading complex      8258607 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 DEAD ResIII Helicase_C PAZ SWI2_SNF2 DND1_DSRM SNF2-rel_dom AAA_22 Motif Other DBs NCBI-GeneID:  8258607 NCBI-ProteinID:  XP_015572953 LinkDB All DBs Position 3:complement(29575617..29589540) Genome browser AA seq 1667 aa AA seqDB search MDTPMEQDRNPLKRSFNEMNNLQDFVDMGLNGTNHHHDHDAASQKPDSTITTSTTTGKGF NPRSYQVKVFEVAMKRNTIAVLETGAGKTMIAVMLIREIGQAIKSNDFKKLIIFLAPTVH LVNQQYEVIKDNTNFKVGEYYGAKGIDGWSMKVWEKEINEHDVLVMTPQILLDALRKAFL NLEMVSLMIIDECHRTTGNHPCTKIMKEFYHKLSNKPKIFGMTASPVVQKGVSSAVDCED QISELETILDSQIYTIEDRTEMDVHVPSAREICKFYDIAQLYSSDIKSKIEASWSKFDAS LLSLQGSIQSSYKDADDRYKTLRQRLYNDYSKILNCLEELGLICAYEAVKICLENSPSTA AFDIYREISLKCKYFLEEVLSIIGTYLPHGDSYLLDLGFDYLKAVRLSYISPKLYELLQV FLSFGVDKEVLCLIFVDRIITAKVIERFVKKVAALVHFTVSYVTGSNTSVDALTPKTQRE TMYAFRSGKVNLLFSTDVLREGIHVPNCSCVICFDLPKTVCCYAQSRGRARQNDSQYIIM LQRGNVKQRDQLFDFIRSEWLVTNTAINRDPDVWTLKTCVPEETEAYIVDVTGASVTADS SVTLIQRYCSKLPSDRYFTPRPTFEFECFEQSFQCKMMLPASAAFQTIVGPVCRSQQLAK QLACLEACKQLHQMGALDDHLLPSVEEPTEDDHTVRRKGSLAGAGTTKRKELHGTTPIHA LSGSWGENLNGATFHAYKFEFSCSIVSEKYSGYILLIESKLDDDVGNIELDLFLVRKTVR ASVSSCGQVHLDAEQMMKAKCFHELFFNALFGKLFSGSKSSRSPREFLLQKETSLLWILS NMYLLLPLEAFSASSDESWKINWRGVNGCSNVVEFLKKNCFLGAEHYNGERVRSSVTECS GGNAVHFANISVDVERVKDMVVLAIHTGKIYSVVEVVGDASAESPFEQNVGGAPSKFSTF SEYFNKKYGIVLLRPRQPLLLLKQSHKPHNLLNPPDEDTLKDGLVVAKQRQFARMPPELL VSIDVPIQTLKSSYLLPSLMYRLESLMLASQLRQEIACQVSNFHIPSLLILEAITTPRSC EKVSMERLELLGDSVLKYSVSCDLFLRYPTKHEGQLSAQRTRAVCNSTLHQLGIGCKLQG YIRDSAFIPRYWVAPGQQPAFYVSCTCGVDTLEVPLDAKFQTEDPKVQIAICCSKGHRWM CSKTISDCVEAVIGAYYVSGGLMAALHVMQWLGMDVEFDPSLVDKIIKTASVRSYTPKED EIKGIESKLGYTFSVKFLLQEAMTHASMQEQGIGYCYQRLEFLGDSVLDLLITWHLYQNH TSMDPGELTDLRSACVSNENFAQVVVRRDLYKHLQHCSTLLLSQIKEYLESFHESDEVAK ATGPKGPKALGDLLESIAGAMLIDAKLNLDEVWRIFMPLLSPLATPQNLELPPLRELMQL CNSLGYFIKEKCINNNDIVHAELRLQLNDVLLVGNGCDRSRKAAKGKAATHLLKKLENRG ITYSWGHSKRRKQDSNHVVDSSPLDITNDKAKDHKKPKKLENQSPAGSGGDPSFAGSSGE NPPVIEAINMKKGGPRTDLFELCKKVQWTTPTYSSTENKSSTPILFDEGIERYNSFVSTI TLNIPFYGTIECTGDPRPDKKSSCDTAALAMLYELQKQGLLIIGDPN NT seq 5004 nt NT seq  +upstreamnt  +downstreamnt atggatactccaatggaacaagacaggaaccctctcaaaaggagttttaatgagatgaac aatttacaagactttgttgatatgggtttgaatggaaccaatcatcatcatgatcatgat gctgcttcccaaaaacctgattctactattactacatccactactactggcaaaggattt aatcctagaagttatcaagtgaaggtttttgaggtggctatgaagagaaacactatagct gtgttggagacaggggctggaaagacgatgatagctgttatgctaattagagaaattggc caagctatcaagtcgaatgactttaaaaaattgattattttcttagctcccactgttcat cttgttaatcagcaatacgaggttattaaagataacacaaattttaaagtgggagagtac tatggagctaaagggatagatggatggagtatgaaggtctgggaaaaggagatcaatgag cacgatgtattggttatgacaccccagatccttttggatgccttgcgaaaggcattcttg aatctagaaatggtatccttgatgataattgatgaatgtcatcgcactacaggcaatcat ccttgtacaaaaataatgaaggaattctaccacaaattgagtaacaagccaaagatattt ggaatgaccgcttcacctgttgttcaaaaaggtgtctcttctgctgtggactgtgaggat caaatatcagaactcgagaccattttggattcccagatttacactattgaagacaggaca gaaatggatgtccatgttccctctgcaagagaaatatgtaaattttatgacatagcacag ctttatagctcagatattaaatctaagattgaagcttcatggtccaagtttgatgcttcc ttgctaagtttgcaagggtcaatccaaagcagttacaaagatgcagatgatagatataag acactgcgacagcggttgtacaatgactattcgaagattttgaattgccttgaagaactt ggcctcatatgtgcttatgaggctgtcaaaatttgtttagagaattctccctccacagcg gcatttgatatttacagagaaatttctttgaagtgtaaatatttccttgaggaagtgctg agcataataggcacctatttgccacatggtgatagttatcttttggatcttggatttgac tacttgaaggcagtacgtttgtcctacatatctccaaaattatatgaactgcttcaggtt ttcctatcatttggagtagataaggaggtactgtgcctcatttttgttgatagaataatt acagccaaagtaattgaaagatttgtgaagaaagttgcagcattagtacatttcacagtt tcatatgttactgggtctaatacatcagttgatgcactgacaccaaaaacacaaagggaa accatgtatgcatttcgctctggaaaggtcaatctattattttctactgatgtgttgagg gaggggattcatgtgcccaactgctcctgtgtaatatgttttgatttgcccaagacggta tgctgttatgcccaatctcgaggacgagctcggcagaatgattctcaatatataatcatg cttcagaggggaaatgtgaaacagagggatcaactatttgattttattaggagtgaatgg ttagtgacaaatacggctataaatagagatcctgatgtttggactctgaaaacatgtgtc cccgaggaaaccgaagcatatattgtggatgtgactggagcttctgttactgcagattca agtgttacccttatacagcgatactgtagtaagcttcccagtgacaggtactttacacca aggccaactttcgagtttgaatgttttgagcagtcatttcaatgtaaaatgatgttacct gctagtgctgcttttcaaacaatagttggcccagtatgtaggagtcaacaactggcaaag cagcttgcatgcttggaagcttgtaagcagctgcatcaaatgggtgccctggatgatcat ctcctaccgtcagtcgaggaacctacagaagatgatcatactgtgaggagaaaaggatca ctagcaggtgcaggaactacaaaaaggaaggaattgcatggaacaactcccattcatgca ttatctggaagctggggagagaatcttaatggggctacctttcatgcatataaatttgag ttttcatgtagcattgtcagtgagaaatattctggatatattcttctcattgaatcaaag cttgatgatgatgttggaaatattgagttggaccttttcttggtcaggaagacagttagg gcttctgtttcttcctgtggacaagtgcatttagatgctgaacagatgatgaaggccaag tgctttcatgaattgtttttcaatgccttattcgggaagttatttagtggatccaaatca tctagatcaccaagagagtttttgctccagaaagaaacaagtttactttggatcctgtca aacatgtatttgctgctaccactcgaggcattcagtgcttcaagtgatgaatcttggaaa ataaattggagaggagttaatggttgcagtaatgtggtagaattcttgaagaagaactgt ttcttgggtgctgagcattataatggtgagagggtgcgctcatctgttactgagtgcagt ggtggaaatgcagtccactttgctaatatttcagttgatgtagaaagagtgaaagatatg gtggtattagcaattcacacaggcaaaatatattctgttgttgaagtagtgggtgatgca tctgctgagagtccttttgagcaaaatgttggcggtgcaccatcgaagttctctacattt tctgagtacttcaataaaaagtacgggatagtgctgttgcgtccaaggcagcctttattg ctgttaaagcaaagtcataagccacacaacctgctgaatcctcctgatgaagatacttta aaagatggcctggtcgtagcaaaacagaggcagtttgctcgtatgccacctgagctttta gtcagtattgatgttccaatacagactttgaaatcatcgtacttactaccatctctgatg taccgtttggagtccctgatgttagccagccaacttagacaagagattgcctgtcaagtt tccaacttccatattccaagtttattgatactggaagccataacaacacctagatcttgt gaaaaagtttccatggaacgattggagttgcttggggattcagttttaaagtattctgtg agctgtgacctttttctaagatatcccacaaaacatgaaggtcaattatctgctcagcgc acaagggctgtttgtaattcaaccctacatcaattgggaataggttgcaaattacaggga tatatacgagatagtgcattcatacctcgttattgggttgctccaggacagcaacctgca ttttatgtttcttgtacttgtggtgttgacactttagaagtgcctttggatgctaaattt caaactgaagatcccaaagttcagattgctatatgctgttcgaaaggccaccgatggatg tgctccaagactatatctgattgtgttgaagccgttataggagcgtactatgtcagtgga ggactcatggctgcactgcatgtgatgcagtggcttggtatggatgttgaatttgatcct tccttggtagataagatcattaagactgcttctgtacgatcttatactccgaaagaagat gaaattaagggcatagaatcaaagcttggttatacattttctgtcaagtttctcttacaa gaggccatgacacatgcctccatgcaagaacagggaattggttattgttaccagaggctt gaatttcttggtgattctgttttggacttgcttattacctggcatctctatcaaaatcac acaagcatggatcctggtgaattgacagatttgcgctcagcttgtgtcagtaatgaaaac tttgctcaagtcgtggtgagaagagacctatacaagcatcttcaacattgttccacattg cttctaagccaaattaaagaatatctggagtcttttcatgaatctgatgaagtcgccaag gctacaggtccaaagggccctaaggcccttggagacctgcttgaaagtattgcaggggca atgttaattgatgcaaagcttaacctagatgaagtgtggagaatatttatgccactactg tcaccacttgcaactccgcaaaatcttgagctgcctccactgcgtgaactgatgcaatta tgcaactctcttgggtatttcataaaagaaaagtgtataaataataatgacattgtgcat gcagagcttaggctacagctcaatgatgttcttttggttggaaacggatgcgatcgaagc agaaaagctgcaaaagggaaagcagctactcatttgttgaagaaacttgagaatagagga ataacgtactcctggggtcactcaaagaggaggaagcaagattctaatcatgttgttgac tcttctcccctagacataacaaatgataaggcaaaagaccataaaaagccgaagaagcta gaaaatcaatcaccagcaggttcaggaggagatccttcttttgctggcagttccggtgaa aaccctccagttatagaggctattaacatgaagaaaggagggcctagaactgatcttttt gaactctgcaagaaagtgcagtggacaacgccgacttatagttcaacagaaaataagtca agcactccaattttatttgatgaaggcattgagagatacaacagctttgtatcaacgatc accttgaacatacccttttatggcactattgaatgcacaggagaccctagacctgataag aagagttcctgtgatactgcagcattggctatgctctatgagcttcaaaaacaggggcta ctcatcattggcgaccccaattaa

DBGET integrated database retrieval system