Ricinus communis (castor bean): 8258649
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Entry
8258649 CDS
T01087
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8258649
03036 Chromosome and associated proteins [BR:
rcu03036
]
8258649
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
8258649
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
8258649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
TAF1D
Motif
Other DBs
NCBI-GeneID:
8258649
NCBI-ProteinID:
XP_015576553
LinkDB
All DBs
Position
10:10545678..10561240
Genome browser
AA seq
1498 aa
AA seq
DB search
MEEKHKQVDDVEIVSSDSFIVDSDDDDDEPSTSGQDNGMHLEEPLTEQEVEELVAELLEV
ESKAAEAQEALEKESLSKVESEVREELGQSLHGDDLEAAVEDEMTAFKEEWETVLDELET
ESAHLLEQLDGAGIELPSLYKWIERQAPNGCQTEAWKSRAHWVGSQVTSEITEAVADAEK
YLQSHRPVRRRHGKLLEEGASGFLDKKLSIDGTKDNVAENGDIDWDSLNKLFSSGSCKDV
ASFGSKHWASVYLANTPQEAAEMGLKFPGVDEVEEIEDIDGCSNDPFIAVAIANEKELIL
SEEQRKNYIKVKEEDDAIIDRKLQLHLKQRRRRKRSKQVLEGKADDLLPLCDISNGKTLE
HGEDVPNNSSEFACESMKSDVSGSFKNLVTEPPMSNGNSGVSESALPEDSESRKSKRPNE
SGEPTNDAKKIRTVIIDSDDEADGINESVSSANRVVVESTLQENIGESGADGHLSQCVNE
EFHCTVCHKICFEVHSHPLLKVIICKDCKCSIEKKMHVKDPECSECYCAWCGRSNDLVSC
KSCKTLFCTTCVKRNIGEECLSEAQSSGWQCCCCSPNQLQRLTLELEKAMGSEDLMDTSS
DSESENSDADIHVAISKKRKKNKKKKKIRRILDDAELGEETQRKIAIEKERQERLKSLKV
QFTDKSKMMNTASCNGNLPEGASFEVLGDAATGYIVNVVREKGEEAVRIPPSISAKLKAH
QVAGIRFMWENIVQSIGKVKSGDRGLGCILAHTMGLGKTFQVIAFLYTAMRSIDLGLRTA
LIVTPVNVLHNWRQEFMKWRPSETKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTA
FRNLSLGKNVKDRNMAREICYALQDGPDILVCDEAHIIKNTRADTTQALKQVKCQRRIAL
TGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTANDVKIMNQRSHI
LYEQLKGFVQRMDMSVVKKDLPPKTVFVIAVKLSPLQRKLYKKFLDVHGFTKDIVSSEKI
RKSFFAGYQALAQIWNHPGILQLRKDRDYVTREETVDNFIADESSSDENLDCNTIIGEKP
RNANDFVQRKSDNGFFQKGWWNDLLQENNYKELDYSGKMVLLLDILTASSHVGDKALVFS
QSIPTLDLIELYLSRLSRHGKKGKLWRKGKDWYRLDGRTESSERQRLVEKFNDPENKRVK
CTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIFRAWRYGQTKPVFAYRLMAHGTM
EEKIYKRQVTKEGLAARVVDRQQVHRTISREEMLHLFDFGDEENSDPLAEVGEEDKQVDD
QNMSYKVGSSLKHKPPLSHVSCSSDKLMESLLGKHHPRWIANYHEHETLLQENEEEKLTK
EEQDMAWEVYRRSLEWEEVQRVSLDESTFERKPPISNAVPSAPNTNSKGPPVRETSSSNV
APSKGILRCRMVQRKCTNLSHLLTLRSQGTKVGCTTVCGECAQEISWEDLNKDSRTAR
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacataagcaagtggatgatgtagaaattgtttctagtgattcctttatt
gttgattcagatgatgatgatgatgaaccgtctacttctggacaggataatgggatgcat
ctcgaggaacctttgaccgagcaagaagtagaagagctagttgctgagttgctggaagtt
gagagcaaggctgcagaggctcaagaagcacttgaaaaggagtctctttccaaagtggag
agtgaagtgagagaggagttgggacagtctcttcatggtgatgatctggaggcagctgtt
gaagatgagatgactgctttcaaggaggagtgggaaactgtgcttgatgaactagagact
gaaagtgctcatttgttggaacaacttgatggagctggtattgaactcccaagcttgtac
aagtggattgaaagacaggccccgaatggctgccagactgaagcttggaaaagcagggca
cattgggtaggatctcaagtgaccagtgaaatcacagaggcagtagctgatgctgagaag
tatcttcaaagccacaggcctgtgagaagacggcatggcaaattattggaggaaggtgct
agtggatttttggataaaaaactttctattgatggaaccaaggataatgtggcagagaat
ggagatatagattgggattctctcaacaaactattctcaagtggttcgtgtaaagatgtt
gcttcatttggtagcaagcattgggcttctgtctacttggccaacactccccaagaagcg
gcagagatggggctcaagtttcctggagtcgatgaggtcgaagagattgaagacattgat
ggctgttcaaatgacccattcattgctgttgccattgcaaatgaaaaggaactaattctt
tctgaggaacagaggaaaaattatataaaggtcaaagaggaagatgatgctataattgat
cggaaacttcaacttcatttgaaacaaaggagacggcgaaagagatctaaacaggtattg
gaaggtaaggcagatgatctgctgcctctatgtgacatttctaatgggaaaactcttgaa
cacggggaggatgtgcctaataactctagtgagtttgcatgtgagagtatgaagagtgat
gtgtctggaagttttaagaacttggttacagaaccaccaatgagtaatggcaattctggg
gtatctgaatctgcattgcctgaggacagtgaatccaggaagtctaaacgtccaaatgaa
agtggggagccaactaatgatgctaagaagattcgaacagttatcatagacagtgatgat
gaagctgatgggataaatgagtcagtttccagtgccaatagagtggtggttgaatcaact
ttgcaagaaaacattggggaatctggtgctgatggtcatctttcacagtgtgtgaatgag
gagtttcactgtactgtctgtcataagatttgttttgaagtgcattcacatccactttta
aaagtcattatttgcaaggattgcaaatgctcaattgagaagaagatgcatgtaaaggat
cctgaatgttctgaatgctactgtgcatggtgtggaagaagcaatgacttagtaagttgc
aagtcatgtaaaacattgttctgtaccacttgtgtgaagaggaatattggtgaagaatgc
ttgtctgaggcacaaagttctgggtggcaatgttgttgttgctctcctaatcagctacaa
agattgacattagaattggagaaagccatgggatctgaagatctaatggatacaagctct
gatagtgagtcagagaactcagatgcagatatccatgttgcaattagcaagaagagaaag
aagaacaagaagaaaaagaaaattcggaggatccttgatgatgctgaattaggagaagag
acccaaaggaaaattgcaattgaaaaggaacgtcaagaacgtctgaagtccttgaaagtg
cagtttactgacaaatctaagatgatgaatactgcaagctgcaatgggaacttacctgaa
ggtgctagttttgaagtacttggtgatgctgcaacaggttacattgtgaatgttgtgagg
gaaaaaggtgaagaggctgtgaggattcctccaagcatttcagctaaattgaaagcccat
caggtggcagggataagatttatgtgggagaatattgttcagtcgattgggaaagtgaaa
tctggagatagaggtcttggttgtattttagctcatacaatgggcttgggtaaaactttt
caggttatagctttcctgtacactgctatgagaagtattgatttgggattaagaactgca
cttattgttactcctgtgaatgttcttcataattggcggcaggagttcatgaagtggagg
ccttcggaaacaaagcctctccgtgttttcatgctggaagatgtgtcaagggatagaaga
gcagaattgcttgcaaaatggagagctaagggtggtgtttttctaattggttacactgct
tttcgaaatttatctcttggaaagaatgtcaaggatcgaaacatggctagagagatttgt
tatgctttgcaggatggacctgatatacttgtttgtgatgaagcccatattattaagaat
accagggcagatacaacccaggcattgaaacaagtgaaatgccagaggaggattgcatta
actggatcacctcttcagaacaatctaatggagtattattgtatggttgattttgtaaga
gaaggttttctcggcagcagccatgagtttaggaaccgcttccaaaatcctatagagaat
gggcagcatactaattcaactgccaatgatgtgaaaattatgaaccaaaggtctcatatc
ctttatgaacaattaaaaggatttgtacaaagaatggacatgagtgtggtgaagaaagac
ctgccacctaaaactgtctttgtgatagcagtaaagctctctccattgcagaggaagtta
tacaagaagtttcttgatgtgcatggattcacaaaggatatagtctccagtgaaaagata
aggaagagcttttttgctgggtaccaggcattagctcagatatggaaccatcctgggatt
ttacaattgaggaaagatagagattatgtcactcgtgaggaaactgttgataattttatt
gcggatgaaagttctagtgatgaaaacctagattgtaacactattattggagagaagcca
aggaatgcaaatgattttgtgcaacggaaaagtgacaatgggttctttcaaaagggttgg
tggaatgatcttcttcaagaaaataattataaagagcttgattatagtgggaaaatggta
ttgctgcttgacatattaactgcgtcttcccatgtgggtgacaaggcattagtttttagc
cagagtatacccactttagatctcatcgaactttatctttcaagattgtctcggcatgga
aaaaagggaaagttatggagaaaaggcaaagattggtacagactagatggaagaacagag
agttctgaaagacaaagattggttgagaagtttaatgatcctgagaataagagagtcaaa
tgcactcttatttcaacaagagctggatctctagggattaatctacatgctgctaaccgt
gtagttattgttgatggttcatggaatccaacctatgatcttcaagcaatttttcgggct
tggaggtatggccagacaaagccggtgtttgcttatagattgatggcacatggaactatg
gaagaaaaaatctacaagcgtcaggtgacaaaggaggggcttgctgcaagggtggttgat
agacaacaagtacatagaactatttctagagaagaaatgctgcatctctttgattttggt
gatgaggagaactctgaccctctagctgaggttggcgaagaggataaacaagtggatgac
cagaatatgagctacaaagtgggtagttcattgaagcataagccgcccctttctcatgtc
agctgctcttcggacaagttgatggagagcttacttggcaagcaccatccaaggtggatt
gccaattatcacgagcatgagacccttttgcaagagaatgaagaggaaaaactgacaaag
gaggagcaagacatggcatgggaagtatataggagatcattggaatgggaagaagtgcaa
cgagtttctcttgacgaatccacattcgagcgaaagccacccatatcgaatgctgttcct
tctgcaccaaatacaaacagcaagggccctccggtacgggagacttccagttccaatgtt
gcaccttccaaaggcattttaaggtgtcggatggtccagcgaaaatgcactaatctttca
cacttgctgacccttagaagtcagggcactaaagttggctgcactactgtttgtggggaa
tgcgcccaggagataagctgggaggatcttaacaaggacagcagaacagcacggtga
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