Ricinus communis (castor bean): 8258796
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Entry
8258796 CDS
T01087
Name
(RefSeq) bromodomain and WD repeat-containing protein 1
KO
K11797
PH-interacting protein
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8258796
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
8258796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Bromodomain
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_HPS5
VPS8_N
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_IP5PC_F
Agenet
WDR90_beta-prop_4th
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
8258796
NCBI-ProteinID:
XP_048235195
LinkDB
All DBs
Position
9:1207549..1221370
Genome browser
AA seq
1735 aa
AA seq
DB search
MALRKYIPSDDAPSLGMKPLRFSKKAHENGQDADAETRVPHDVDIDLREVYFLIMHFLSA
GPCHRTYGQFWNELLEHQLLPRRYHAWYSRNGAHSGDENDDGASFPLSYNKLVERYPHVE
KDHLVKLLKQLLLTDAASQGLADDNTESSSQGLVGSRVLNAAHVPTLLGTGAFSLLSDDK
DKGEDQVKHPPAHMRWPHMSADQVRGLSLREIGGGFPRHHRAPSIRAACYTIAKPATMVQ
KMQNIKRLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL
AVSSNNTLVASASNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPGSVYQLLSSSDD
GTCRIWDARYSNFSPRLYIPRPLDSLAGKNSGASSSSGPQTHQIFCCAFNANGTVFVTGS
SDNLARVWNACKSNMDDSDQPNHEIDVLSGHGNDVNYVQFSGCAVASRLSLSDSSKEENV
PKFRNSWFSHDNIVTCSRDGSAMIWVPKSRRSHGKAGRWTRLYQLKIPAPPVPPQPPRGG
PRQRILPTPRGVNMIIWSLDNRFVLAAVMDCRICVWNAADGGIVHSLTGHTDSTYVLDVH
PFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEISRFKLVDGKFSPDGTSIILSDDVGQLYI
LNTGQGESQQDAKYDQFFLGDYRPVIQDTYGNVLDQETQLVPYRRNMQDLLCDSGMNPYP
EPYQSMYQKRRLGALNMDWKPPSIKLAVGPDFSLDPEYQMLPLADLDVLVEPLPEFVDVM
DWEPENEVQSDDNDSEYNVTEEYSSGGEQGSLNSSSSVDPDCSSEGSEIEGKDSFHRSTR
KKQKAEIEIMTSSGRRVKRRNLDECVGNTFRSHRTRKSKIGRKTSKAKSSMLKALRPQRA
AARNALSLFSKITGTASGGEDGDSSEIDSSESESMQQQSDIQSDESERSLQNAQNRNMKG
KEVSLEESENFVKSHEFPESHINAGNRRRLVLKLPVRDSTKVLMSGSRIPDRSQVALVGS
SSLTAPQMATRVNGVHIRSQDLGSSSSYTNCTTVRGRGREQTESCYLDLSEGYKNGDVKW
GGVRARTAKRQRFGEAVSSAACSRFSIGLSDPKEKENNADGFSTHNTCSVLSPPPEVQDC
AGKMDEMTTNERDTGAETPQAANNMPNGKEHPSLNGCIDFSELPKLTHMVNGNDNSFEIN
KGSTPIPTKLQIKFRKISRDSFSQENEGVDLSLDSPAGMRQNPISEVPEYDRTNRFAPVN
EHDEFRELDVQIDEGSVASLDDSMGSQSRPKNMYNVVYRRSKLSRDRANSEGDSGIRESI
SHSITEEHSARYDLNERTDGAHRSHLMGLQAEIDDPVNCIMKLGQELKSEDTNRNLHNGS
TSRCQLSGKEWRSSSRMTVGIRSTRSRRPSYHFRDASPVNRRKSHQPAKRSWLMLSMHEE
GSRYIPQLGDEVVYLRQGHQEYKEVCKDQNVSKEPGPWKSVKGHIRAVEFCKVEGLEYST
TPAGDGCCKMTLIFVDPTSDVFEKTFKLSLPEVTGFPDFLVERTRFDAAMQRNWTSRDKC
KVWWKNEGEEDGSWWDCRVVSVKPKSSEFPDSPWERCTVKYKSDPSEEHHHSPWELFDDD
TQWEQPHIDDEIRNKLMSALAKLEQSGKRAQDRYGVQKLIHVSEKTNFTNRFPVPLSLDL
IQSRLENNYYRTFEALKHDIRVMLSNAEVHFAKNADLAAKMKRLSEWFERTLSSL
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcggaagtacattccttcagatgatgcaccttctcttggaatgaagcctttg
agattttctaagaaggcacatgagaatggtcaagatgcagatgcagagacaagagtgcca
catgatgtggatattgaccttagagaagtgtacttcttgattatgcattttctttcagct
gggccatgtcaccggacatatggacagttctggaacgaacttcttgaacatcaacttttg
cctaggagatatcatgcttggtattcaaggaatggggcacatagtggagatgaaaatgat
gatggtgcatcattcccattaagttataataagttggtggagaggtatcctcatgtggag
aaggatcacttggtaaagcttttgaagcagctattactcacagatgctgcatcacaaggc
ttagctgatgataatacagaatcttcatcacaaggtttagttggttcaagggttctaaat
gctgctcatgttcctacacttttgggaacgggagcgttttcacttttgagtgatgataaa
gacaagggagaagatcaagtcaagcatcctcctgcccatatgcgatggcctcatatgtct
gctgatcaggttcgagggctgagtttgagagaaatcgggggtggttttccaaggcatcac
cgtgcaccttctattcgtgcagcttgttatactattgcaaaaccagcaactatggtacag
aaaatgcaaaatattaagaggctacgtggacatcgaaatgctgtctattgtgcaatcttt
gatcgatcagggagatatgttattactggctctgatgatcgccttgtaaaaatctggtcc
atggaaactgcattttgcttggccagctgtcgtggacatgaaggtgacattactgacttg
gctgtgagctccaacaacactttggtggcttctgcttcaaatgattgtataattcgtgtg
tggcgtttgccagatgggcttccgatatctgttctgcggggacacactggcgctgttact
gccatagcatttagtcctagaccaggatctgtgtaccagctcctctcgtcatctgatgat
ggaacatgtaggatctgggatgctagatattccaacttcagtccacggttatatattcct
aggcctttagattccttagctggaaagaatagcggtgcatcctcaagcagtggtcctcag
actcatcaaatattttgctgcgcgttcaatgctaatgggactgtgtttgtcactggaagc
tctgacaatcttgctagggtatggaatgcttgtaaatcaaacatggatgattcagaccaa
ccaaatcatgagatagatgtattatctggccatgggaatgatgtcaattatgttcagttt
agtggttgtgcggtggcgtctagattgtctctctctgacagctcgaaggaagagaatgtt
ccaaaatttagaaactcatggttttctcatgataacatagtgacctgttctcgagatggc
agtgcaatgatatgggttccaaaatcacgtagatctcatgggaaagctggccgctggact
cgattatatcaactgaaaattcctgctcctccagtgccacctcaacctccaagaggaggt
cctcgtcagagaattttaccaactcctcgaggtgtcaacatgatcatatggagcctagat
aatcgttttgtccttgctgcggtcatggattgcagaatttgtgtttggaatgctgctgat
ggtggcatagtacattctttgactggtcatactgattccacgtatgttctggatgttcat
cctttcaatccacgaattgctatgagcgctggttatgatggaagaactatagtgtgggat
atatgggagggcacacccatccggatctatgaaatttcgcgtttcaagctagttgatggg
aagttttcaccggatggcacatctattatactttcagatgatgttggtcaattatatata
ttaaacacaggccaaggtgaatcccaacaggatgctaaatatgaccagttcttccttggt
gattaccggcccgtgatacaagacacctatgggaacgtacttgaccaggaaactcagctt
gtgccataccgacgaaatatgcaagatctcctatgtgactcaggaatgaatccttatcca
gaaccttatcagagtatgtaccagaagagacggttaggagctttgaatatggactggaag
ccaccttctataaaacttgctgttgggcctgatttcagtttagacccagaataccaaatg
ctgcccttggcagacttggatgtattggttgaacctttgcctgagtttgtagatgtcatg
gattgggaaccagaaaatgaagttcaaagtgatgataatgattcagagtacaatgtcact
gaagaatactctagtgggggtgagcaaggaagtttaaattctagttcgtcagtcgatcca
gattgcagttctgaaggtagtgagatcgaaggcaaggacagctttcataggtctactagg
aaaaaacagaaagctgaaattgagataatgacgtcttcagggaggcgtgttaaaaggagg
aatttggacgagtgtgttggtaataccttcagaagtcaccgaacaaggaaatcaaagatt
ggtcgaaaaacttcaaaggcaaagtcttccatgttaaaggctttgagacctcaaagagca
gctgcccgcaatgctcttagtttgttttcaaaaatcactggaacagcttcaggtggagaa
gatggggatagctcagaaattgattcatcagaaagtgaatccatgcagcagcaatcagac
atccagagcgatgaatcagagagatccttgcaaaatgcacaaaacaggaatatgaaaggg
aaagaagtttcattggaagagtctgaaaattttgtgaaatctcacgaatttcctgaatct
catattaatgctggaaataggagaagattggttcttaaactgccagttcgggattcaact
aaggtcttaatgtcagggagtagaatacctgacagaagccaagttgctctagttggttca
tcctcattgacagcacctcaaatggccactagggtaaatggggttcatataagatcacaa
gatctgggatcctcttctagttatacaaactgcaccactgtgagagggagaggaagagag
caaacagagagctgttatttagatttgtccgaaggatacaaaaacggggacgtaaagtgg
ggaggggtcagagcccgtacagctaaacgtcagagatttggagaagccgtgtcttcagct
gcatgttccagatttagtataggtcttagtgatcccaaagaaaaagagaataatgctgat
ggattttcaactcataatacttgcagcgtcttatcccctcctcctgaagttcaagattgt
gccggtaagatggatgaaatgacaactaatgagagagacactggggctgaaacccctcag
gctgcaaataatatgcccaatggtaaagagcacccaagtttgaatggttgcatagatttc
agtgaattacctaaattgactcacatggtcaatgggaacgacaactcttttgaaattaac
aagggtagtacacccatcccaacaaagttgcagataaagtttaggaagatttcaagagac
tcttttagtcaggaaaatgagggggttgatttatcacttgatagccctgcaggcatgaga
cagaatcccatttcggaagtccctgaatatgatagaaccaatagatttgctccagttaat
gaacatgatgagtttcgggaattagatgttcagattgatgaaggttctgtcgcctcattg
gatgattcaatgggttcccaatcacgtccaaaaaatatgtataatgttgtttatagaagg
tcaaagttaagtagagatagagctaactcagaaggtgatagtggcatcagagagagcatt
tcacattctattactgaggaacacagtgccagatatgacttgaatgagaggactgatgga
gctcacaggagtcatctcatgggattacaggcagaaatagatgatccagtgaactgtatt
atgaagttggggcaggaacttaagtcagaggatacaaatagaaatctgcataatggttcc
actagcagatgtcaactttctggtaaagaatggagatcaagctcaaggatgacagttgga
ataagatctactagaagtaggagacccagttatcattttcgtgatgcaagtccagtaaat
aggaggaaatcacatcaaccagccaaaagatcatggttaatgttgtccatgcacgaggag
ggctctcgttatatccctcagctaggggatgaagtagtatatttaagacaggggcatcag
gagtacaaagaggtatgcaaagaccaaaatgtctcaaaagaacctgggccttggaagtca
gtaaagggtcatataagggcagtggaattctgcaaagttgaaggactggagtattccaca
acaccagctggagatggttgctgcaaaatgacactcatatttgtagatcctacttctgac
gtgttcgagaaaacattcaaattaagtctacctgaagttacaggtttcccagattttctt
gttgaaagaactcgctttgatgctgctatgcagagaaattggacaagcagggataaatgt
aaagtctggtggaaaaatgagggtgaagaagatggcagctggtgggattgccgggttgtg
tctgtaaagcccaaatcttccgagtttccagacagtccatgggagaggtgcactgttaag
tacaagagtgatccctcagaagaacatcaccacagtccttgggagctttttgatgatgat
actcaatgggagcagcctcatattgatgatgagattaggaacaagctgatgtctgcctta
gccaaattagagcaatcaggcaaaagagcacaggaccgctatggggttcagaaattaatc
cacgtttcagagaagactaattttacaaacaggtttcctgtgccattgtctctggatctg
atccagtcaaggttggagaataactactatcgaacttttgaggcattgaagcacgatatt
agagtcatgctttcaaatgcagaggttcactttgcaaagaatgcagacctggctgccaaa
atgaaacgcttgtcagaatggtttgaacggacgttgtcatctttgtaa
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integrated database retrieval system
