Ricinus communis (castor bean): 8258849
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Entry
8258849 CDS
T01087
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X2
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8258849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8258849
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
8258849
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
8258849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
NTP_transf_2
PAP_RNA-bind
Motif
Other DBs
NCBI-GeneID:
8258849
NCBI-ProteinID:
XP_002519259
UniProt:
B9RZU0
LinkDB
All DBs
Position
9:949346..952792
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AA seq
492 aa
AA seq
DB search
MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIVVAWAKKVAWQRRLPRLQIAST
NATILTYGSYGLGVYGPESDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSDIHCVKDA
KVPLMRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQ
FVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNF
FTTYATWPWPTPVMLQDGMSSPAEDFIETRSFMPIRLPCSPHEYCHSNITKSTYYRIRTE
FLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFRA
LLLKLEGLQGQCDPSPVEYADRDVSEPNVVFYWGLNPSRSNYIDLESVEEDFLRNIYSGY
HGTRRKLELSIVKAAELPKNAQFNSGNGKKMKAYWKVVDKEQRTPAYSQHLPGYFVGYLA
TNGDTECPSCGG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaacgatccctttcgcttcttaagtttatggctaatgaaggactggtgcct
tctcctcgagaagaagagaaaaggaagaatgttattttaaatctaaagcagatagtggtg
gcatgggccaaaaaggttgcttggcaacgtagactccctagactacagattgcatctacc
aatgctacaatattgacatatggatcttatggcctcggtgtttatggtccagagtctgat
attgatgcaatatgtgttggtcctttctttgctacattggctgaggattttttcattgtt
ttgagaaacatgctcaaaaatagaccagaagtgtcggatattcattgcgtgaaggatgca
aaagttcctttaatgcggtttaagtttgatggcatctcaattgatcttccatatgctcag
cttaaagtattagctgttcctgataatgtggacatgcttaatccattcttcctaatgaat
attgatgaaaccagttggaagagcttatctggtgtacgtgcaaatcaacggattcttcag
tttgttcctaacctggagaattttcagtcaatgttgcggtgcattaaactatgggcaaga
aggcgaggagtgtgtggtaatctcaatggttttctgggaggagttcatttggcaattcta
tcagctgttgtttgtcaaaaatatccaaatgccagtgtcagtgctctaatatcaaacttc
tttactacgtatgccacctggccttggcctacacctgtaatgttgcaagatggaatgtca
tcaccagctgaagattttattgagacacgttctttcatgcccattcgtttgccatgtagt
ccacatgagtattgtcattccaatatcactaaaagcacatactacaggatcagaacagag
tttctcagagggcattccttgactaaggatcttttaaagccagattttgactggaatggg
atttttgagccttttccttattcaaagaagtatacccgatttgtcaagatctacctatca
gctcctgatcaagatgaggtaggagactgggtgggttgggtgaagtcacgcttccgtgct
ctacttcttaagcttgaaggattgcagggccaatgtgaccccagtcccgtggaatatgct
gacagagatgtatcagagccaaatgttgtattctactggggtttaaacccaagtaggagt
aattatattgatttagaatctgttgaggaggatttcttgaggaatatatatagcggatac
catggaactcgtagaaagttggaattatcaatcgtgaaagctgctgaactgcctaagaat
gctcagttcaatagtggaaatggtaagaaaatgaaagcatattggaaggttgttgacaaa
gagcaaaggaccccagcatactcacaacatctgccaggctactttgtagggtatttggca
actaatggagacaccgagtgcccgagttgtgggggttaa
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