Ricinus communis (castor bean): 8258873
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Entry
8258873 CDS
T01087
Name
(RefSeq) autophagy-related protein 18b isoform X3
KO
K17908
autophagy-related protein 18
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
8258873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8258873
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8258873
Membrane trafficking [BR:
rcu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
8258873
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
8258873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_Vps41
Beta-prop_EML_2
BCAS3_WD40
Beta-prop_RSE1_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
DUF2415
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
8258873
NCBI-ProteinID:
XP_015583750
LinkDB
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Position
3:complement(23290001..23297072)
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AA seq
382 aa
AA seq
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MSSHSSNYPILSASFNQENTGFAVSTRDGFKILDPNTGRLCYERGVGAFIIVEMLYSSSL
LAIVGAGEQPSLSPRRLCLFNTSTGTALRELNFLTSILAVRLNRKRLVVLLQEKTFIYDS
NTLAILDTIDTVPNVKGLCAFSPSLDGCFLALPASTTKGSVLVYNVMELQSHCEIDAHRA
PLAAVALSSNGMYIATASEQGTIIRVHLVQEATKSYSFRRGTYPSTIFSLSFGPSKQLPD
ILVASSSSGSVHVFSLGFTINQRSRRSSSFLGSILPDSVNDALDPAHHHVLHNAVPAGVK
SYVVVRKVDEVTDTSSTEFLVFRATLSIITFNGYFQEYVIDINNQNESKWSLEHEFNLLT
VLSANLRRRTTFSAGLIWFCCC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccactcctctaattaccccatcctctctgcttctttcaatcaagagaacact
ggttttgcagttagcacgcgagatggcttcaaaatactcgatcctaatacgggccggctc
tgttatgaaagaggtgtaggagcttttattatagttgaaatgctttacagttctagtctt
cttgcgattgttggtgctggtgaacagccttctttatcgccgaggcgtctttgtttgttc
aatactagcactggaactgctctgcgtgaattgaattttttgacttccattcttgctgtt
cgtttgaatagaaaaaggcttgtggttcttttgcaagaaaaaactttcatttatgactca
aatacgcttgcaatattggatactattgatacagttccgaatgtaaaagggctttgtgca
ttttcccctagtttggatggttgctttttggctcttcctgcaagtacaaccaaaggatca
gttttggtgtacaatgtcatggaacttcagtcacattgtgagatagatgctcatcgtgca
ccattggctgcagtggcactttcttcgaatggaatgtatattgcgacagcatctgaacag
ggaaccattatcagagttcatctagttcaagaagcaactaagtcatacagtttccgtagg
gggacatacccatctacaatattttccttgtcatttggaccttcaaagcagcttccagat
attcttgtagcttcaagttcttcaggatctgttcatgtcttttcactggggtttaccatt
aatcagagaagtagaagatcaagtagcttccttgggtcaatattacctgattctgtaaat
gatgctctggatccagctcatcatcacgtgcttcataatgctgttccagctggagtaaaa
agttatgtggtagtgcgcaaagtggatgaggttactgacacatcatcaactgaatttctt
gtttttcgagctaccctatcgataataacctttaatgggtacttccaggagtacgttata
gatattaacaatcaaaatgagtctaagtggagtttggagcacgaatttaatcttttgacg
gtgctatcagctaatctcaggagaagaacaacattttcagctggtctgatatggttttgc
tgttgctga
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