Ricinus communis (castor bean): 8258890
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Entry
8258890 CDS
T01087
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8258890
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
8258890
Transfer RNA biogenesis [BR:
rcu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
8258890
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
8258890
NCBI-ProteinID:
XP_048225597
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Position
10:4189667..4199448
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AA seq
793 aa
AA seq
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MMAVRAVNTCSILHFSKAPPFFLVRCRFKTLRFCQYSNLSSRRPIIRCESQFQFHGTNIR
SFSVQSLVDSVMEELASLRKSRRKRVCPAIKLTGSGELLDDKLVNRPLEKGLLLEFKKDT
DRILLAVARRPDGKKNWMVYDQNGVTSSIKPQQVTYIVPGVENFDHTEISNFVQKAQDNL
DPSLLEFAWVELLETNKSVTPEELAEMIFGSAEPLESYCAHLLLSKDEMYFTVLETKGSR
SLYGPRPTSQVEELMHRKLAKDAAEKELQEFVQLLKSAKAMPSHAKPSKSSWMIEEKTRH
KIESLEAYAIDACKSDDQKRTAGMILKAMGMAKIASSALNLLIDVGYFPLHVNLDILKLN
IRTDHSDEILSAAENLLLESVDPDKIHRKDLTHLKVYAIDVDEADELDDALSATKLQDGR
IKIWIHVADPGRYVQPGSKIDREAMKRGTSVFLPTATYPMFPEKLAMDGMSLKQGEVCNA
VSVSVVLHSDGCIAEYSVDNSIIKPTYMLTYESASELLHLNLEEEAELRILSEAASNRLQ
WRCQQGAVNTATLETRIKVANPEDPEPSINLYVENQADPAMRLVSEMMILCGEVVATYGS
CNNIPLPYRGQPQSNIDVSAFAHLPEGPVRSAAVVKIMRAAEFDFRKPVRHGILGIPGYV
QFTSPIRRYMDLLAHYQVKAVLRGEPPPFSAGQLEGMASMINMQARVVRSLCNSNLRYWI
IEFLKRQPKERRYRALILRFIKDRIAALLLVEVGFQASAWVSTGVHIGDEIQVQVKEAHP
RDDFVSLTEVVQG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggttcgagccgttaacacttgttctatccttcatttttctaaggcgcctccg
ttctttctggtccgttgtcgttttaagaccttgcggttttgccagtactctaatctctcg
tctcggaggccgataattcggtgcgagtcacagtttcagtttcatggaactaatattagg
agcttttctgttcagagtcttgttgatagcgtcatggaagagcttgcttctcttcgcaaa
agcagacgcaagagagtttgccccgctattaaattaactggcagtggagagcttctggat
gataagctggtaaaccggccacttgagaaaggattgctgctggaattcaagaaggatact
gacaggatactgctggcagtagcgcggagacctgatggaaagaagaattggatggtgtat
gatcagaatggtgtaacatcctcaattaaaccacaacaagttacatatattgtacccggt
gttgaaaattttgaccacacagaaatctcaaactttgttcagaaggctcaagataacttg
gacccatcactcttagagtttgcttgggttgagcttcttgaaacgaataaatcagtgaca
ccagaggagttagcagagatgatttttggtagtgcggaacctcttgagagctattgtgca
catctgctactatcaaaagatgaaatgtatttcacggtgttagaaacaaaaggttctcgt
tcgctttatggacctcggcctacttcacaggtagaagaacttatgcacaggaagcttgca
aaggatgctgctgagaaagaacttcaggagtttgtccaactactaaagtctgccaaggca
atgccttcgcatgctaaaccttccaaatcttcgtggatgattgaagagaaaactcgacac
aaaattgagtctcttgaagcatatgctattgatgcgtgcaaaagtgatgaccaaaagaga
actgctgggatgatcctaaaggcaatgggaatggcgaaaatagcatcctctgctctaaac
ctccttatagacgttggatattttccgctccatgttaatcttgatatattgaagttaaac
atccgtactgatcattcagatgagattttgtcagctgccgaaaatcttctgttagagtca
gttgacccagacaagattcatcgaaaagatctcactcacttgaaggtctatgccattgat
gttgatgaggctgatgagcttgacgatgccctgagtgcaacaaagttacaagatggtcgg
atcaaaatctggatacatgttgcagatccaggtcgttatgtgcaacctggaagcaaaata
gacagggaggcaatgaaaagaggaacttctgttttcttgcctacggctacttatccaatg
tttccagagaaacttgccatggacggtatgagtttgaaacaaggagaggtctgcaatgct
gtttcagtatctgttgttttacattctgatggctgcattgcagaatactctgtggataac
tcaatcattaaaccaacctatatgctgacctatgagagtgcatctgagctgcttcatttg
aaccttgaggaggaggctgaattgagaattctttctgaggctgcatctaaccggttgcag
tggcgttgccaacagggtgcggtcaacacagccacattggaaactcgcatcaaggtggct
aatccagaagatccagagccatctattaatctttatgttgaaaaccaagctgatcctgca
atgcgacttgtctctgagatgatgatactctgtggagaagttgtagccacctatggctct
tgcaataacattcctttaccctatagaggacagcctcaatcaaatatcgatgtatctgca
tttgcacatcttcctgaaggacctgttagaagcgctgcagttgttaaaataatgcgtgct
gctgaatttgattttaggaaacctgtacgccatgggattctggggattcctggctatgtt
cagtttacttctcccattcgtagatatatggatcttcttgctcattatcaggtcaaagca
gttctcagaggtgaacctcctcctttttcagctggtcagctggaggggatggcatcaatg
attaatatgcaagctagggtagtgaggagcctctgcaacagcaatcttcgctattggata
atagaattcctgaaaaggcagccaaaggagagaagatatcgtgcactgattcttagattc
attaaagatcggatagcagccttgctactcgttgaggttgggtttcaagcatctgcatgg
gtgtccacgggagtacatataggagatgaaatacaggttcaggtaaaagaagctcatccg
cgtgatgattttgtttccctcactgaggttgtacaaggataa
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