Ricinus communis (castor bean): 8258908
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Entry
8258908 CDS
T01087
Name
(RefSeq) protein RNA-directed DNA methylation 3
Organism
rcu
Ricinus communis (castor bean)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Motif
Other DBs
NCBI-GeneID:
8258908
NCBI-ProteinID:
XP_015583775
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All DBs
Position
6:complement(24907781..24917892)
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AA seq
1721 aa
AA seq
DB search
MPPKTLFTFTRDTRSKNQKPRLLHFQRHKQAHSSHCHRKMSAKGKEVATGSKRKHSDGDG
SGGGRKRNNRAVLRFFEDSADLDEDEEESDFSDLEEEEPDIELKLKKEPAKTPNIPFVPK
EEVMYEEEFDKMMEERYRDGSTFVRYAEDVYEAKTVERDSILTSSRDPIVWKVKCMVGRE
RHSAFCLMQKFVDLKSLGTKLQIISAFSVDHVKGFVFIEADKQCDINEACKGLCSIYSTR
VAPIPKNEVSHVLSVRSKSNAVREGMWARVKSGKYKGDLAQIVTVNDARKRATVKLIPRI
DLQALAQKFGGGVSMKNAATPAPRLISSSELEEFRPLVQHRRDRDTGLFVEVLDGLMLKD
GYLYKRVSVDSLSCWGVVPSEEELLKFQPSENTESDNTEWLKQLYGSPKKKRIIGIDKGG
EKGESSSGSGIQHSFELYDLVCFSRKDFGVIIGMEKDDYYKILKEGPEAPVVVTVARNDI
KKGPSDMRFTALDHRTKIISVNDMVKVVEGPLKDRQGTVKQIYRGIIFMHDQNETENGGY
FCSKAQLCEKIKLSFDVCNEKGGESSSFSFEDIPSSPKSPLSPKRPWQTKDNNWDFNRGE
KDGMFSIGQTLRIRVGPLKGYLCRVLAIRYSDVTVKVDSKHKIFTVKCEHLSEIRGKSSA
TPLSEDPGSSSFKPFDLLGTEGGSKGWTDGAGTSADGDRWNAGGITAESNSWSSFPSSGL
KLQPEPDSSGSAGNDVKEDAWERKVTSNQNSSWGAAAAAAADKVVDNNDQAHGWGKSEDG
WNKTSTNIESSGGTSGGWGKAADSSKDSGDGWGQAKLDPGNSTLDAAAAWNKEKNVAENP
TSSWGDVATAKNQQDSWTSKDTVESRSWEKSKSFTAGEDNLSKSTGWNQQKSQNKWDTWR
STAEAQNKNTVQGDSWGKAKDSSVGGKVDWKSSTATAEKPTKSWGNEGGSWAQESKSTDE
ASDWMNGKVDGANQTANWSNQKNQSEDAAGWTTGGSGSQSQTDNWNKPKSSGADGGSSWG
KQGKPETFDADGGSSWNKKGESSLEKQEGGSSWGKQGGASSWGKQEGGSSWSKQDGGSFN
KVDRCQDSGGWNKSFDGGRGSDGRRGRGGGRGGRDQYGRGRSFGAGQSSDWNRGEGNNWT
GDGTSKSPPAWSNDQAGGWGKKPNTSWGDNGPGWNKSHGADAKIGESGDKWNSANLPCEV
AKQSDWLASKTSNSSSWDNGAGDGDDTLPSGWGSNPESSGQKSNWKQKSDEIAKESEHKD
QGDGWGRGKAFDGGSAKGWGHSASWKSESIDAGKSHDSEWGKKGNWNSASGDSGGNAGSS
WGKKSNWNSGSNNGDGNQDSGWGNKSSLNLESGDANQSSGWGKKSNWNSSSGDGQGSSGW
GKKNSWNQDSFTASGEDQSEVSGDRAGGGSWRGGFRGRGGSDRGGFRGRGERGGFGGRNG
SERGGYGGRGRSDRGGFGGRGRSDRGGFGGRGGSDRGSFGGRGRSDRGGFGGRGRRDNSS
DWNNNDSGEDKAFDWKNGANNSGGWKTSGGGSWKQGGDDKGQFESWNSGSGATGNQPGGW
SSLGSGWNQSAKTGGSEAGGWNKGGDSNSEAAGKAGNNWNSDSSGGGRRTSWNQSSQEGR
VSNDVGDGWKKEQDSNAQGQGGGWGSQGGWSKGAGSGNTDTSGDQVKIWNSSSGGQSSGW
SQSKEAKEGTNAGGEPTDPWGKASASNWGNKGDGGSSKGGW
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaactctattcaccttcacgcgagacacccgctctaaaaaccaaaagccc
agactgctccattttcagagacacaaacaggcacactcttcgcattgtcatcgcaaaatg
tcagccaaaggaaaggaggttgccaccggcagtaagcggaagcacagcgatggagacggc
agcggtggtggtcggaagaggaacaatcgcgctgttctccggttcttcgaagattcagct
gatcttgacgaggatgaggaggagagcgattttagtgatctcgaggaggaagaacctgac
atcgagctgaaactcaagaaagaaccagcaaaaacaccaaacattccttttgttcccaag
gaggaggtaatgtatgaagaagaatttgataagatgatggaggaacgctacagggatggt
tctacttttgtgagatatgctgaagatgtttatgaggctaaaacagtggaaagagattcg
attcttacctcttctagggatccaattgtctggaaggtcaaatgcatggtaggacgcgag
aggcattcagctttctgccttatgcagaagtttgttgacttgaaatctctaggtaccaaa
ctgcaaataatttcagcattttctgttgaccatgtgaagggttttgtttttattgaagct
gacaagcaatgcgatattaatgaggcttgtaaagggctttgtagcatatattctaccaga
gtggcaccaattccaaaaaatgaagtttcccatgtgctctctgttcgaagtaaatctaat
gcagttagagagggcatgtgggcccgtgtcaagagtggaaaatataagggggaccttgca
cagattgtcactgtaaacgatgcacggaaaagagcaacagtgaagcttattcctagaatt
gatctacaagcattggcacaaaaatttggtgggggagtttctatgaaaaatgctgccaca
cctgctccaagattgatcagctcaagtgaactcgaggagttccgaccccttgttcaacat
agacgtgaccgtgatactggactgtttgttgaggttcttgatggtctgatgctcaaagat
ggatatttgtataaaagagtttctgtagattcattgagctgctggggtgttgtgccatca
gaagaggagttgttgaagttccagccttctgagaatacagagtctgacaacacagagtgg
cttaagcagctttatggttcaccaaagaaaaaacggataattggaattgataaaggcggt
gagaaaggggagagctcatcagggtctggcatacaacatagctttgaattatatgatctt
gtgtgttttagccgcaaagattttggtgttatcataggcatggaaaaggatgactattac
aagattctaaaagagggaccagaggcaccagttgtggtgactgttgcacggaatgatata
aaaaaggggccctctgatatgagatttactgctttagaccatcgcacaaaaattatatca
gttaatgatatggtcaaggtggtggaaggtccattaaaggataggcaaggaactgttaag
caaatctatagaggaattatttttatgcatgatcagaatgagacagaaaatggtggttat
ttctgttccaaagctcaactgtgtgagaaaatcaagctttcttttgatgtgtgcaatgaa
aagggtggtgaatcaagctccttcagttttgaagatattccatcatctcccaaatctcct
ctatcacctaaaagaccatggcaaacaaaggacaataactgggacttcaaccgaggggag
aaggacgggatgttctccattggtcagaccctgagaattcgagtaggacctttgaagggg
tacctttgccgcgtcttggctatacgttattctgatgttactgtgaaggttgattctaag
cacaaaatttttacagttaaatgcgagcatctctctgagattcgtgggaaaagctctgct
acacctttgagtgaggatccaggatccagttctttcaaaccatttgatctacttggaact
gaaggtggctctaaaggttggacagatggagcaggaacatcagctgatggtgataggtgg
aatgctggaggaattaccgcagaaagtaactcttggtccagcttcccctcttcaggctta
aagcttcaacctgaacccgattcatcaggttctgcaggtaatgatgtgaaggaagatgct
tgggagaggaaggtgacttcaaaccagaattcatcttggggggcagctgcagctgcagct
gctgacaaagtggtagataataatgatcaagctcatggttggggaaagagtgaggatggc
tggaacaaaacatccactaatatagagtctagcggaggtacctctggaggctggggtaaa
gctgcagattcttcaaaagattctggagacggatggggtcaagcaaaacttgatcctgga
aattctacactggatgctgcagcagcttggaacaaagaaaaaaatgttgctgaaaatcca
accagcagttggggggatgtggctactgcaaaaaatcagcaagactcttggaccagtaaa
gatactgtagaatcaagatcctgggagaagagtaaaagctttactgcaggtgaagacaac
ttgagcaagagtactgggtggaatcaacagaaatctcagaacaaatgggatacttggaga
agcactgcagaagcccaaaataaaaacactgttcaaggagattcttggggtaaagctaaa
gacagttcagttggaggtaaagtagactggaaaagttcaactgctacagccgaaaagcca
acgaagagttggggcaatgaaggtggtagctgggcccaggaatcaaaaagcactgatgaa
gcaagtgactggatgaacggcaaagttgatggtgcgaatcaaactgcaaattggagtaac
cagaaaaatcagagtgaagatgcagctggttggactacaggtggatccggcagtcaaagt
cagactgataattggaataaaccaaagagctctggggctgatgggggatcatcttggggt
aaacaaggaaaaccagagacctttgatgctgatgggggctcttcttggaataagaaaggg
gagtcctctttggaaaaacaagagggaggttcctcttggggtaaacaagggggagcttct
tcatggggtaaacaagaggggggttcctcttggagtaaacaagatggagggtcttttaat
aaagtggatagatgtcaagactctggtggttggaacaagtcatttgatggaggtcgtggg
tcagacgggaggaggggaagaggaggtggtcggggaggtagagaccaatatggcagagga
agatcgtttggtgctggtcagtcttcagactggaacagaggagaaggaaataattggact
ggtgatggaacatcaaagagtccacctgcttggagcaatgatcaagctggtggttggggt
aagaaaccaaatacttcttggggggacaatggacctggatggaacaaaagccatggagct
gatgccaagattggtgaaagtggggacaaatggaactccgcaaacctcccttgtgaagtt
gcaaagcagtcggactggcttgcttctaaaacttccaattcgtccagctgggataatgga
gctggtgatggggatgataccctgccttctggttggggcagtaatcctgaatcttctggg
cagaagtctaactggaaacagaaatctgatgaaattgcaaaggagagcgagcataaagat
caaggagatggttggggacgtgggaaagcttttgatggagggtcagcaaagggatggggt
cacagtgcaagctggaaaagtgaatcaattgatgcaggtaaaagtcatgattctgaatgg
ggcaaaaagggaaactggaactctgcatctggtgattcaggtggaaatgcaggctcttct
tggggtaagaaaagcaattggaactctggatccaacaatggggatgggaatcaggattca
ggttggggcaataagagcagtttaaacttagaatctggtgatgcaaaccaaagttctggt
tggggtaagaaaagtaactggaactcttcttctggtgatggacaaggctcttctggttgg
ggcaagaaaaacagttggaaccaggattcttttactgccagtggtgaagatcaaagtgag
gtttctggtgatagagcaggtggtgggagttggaggggtggtttcagaggtagaggtggt
tctgacagaggaggctttagagggagaggagagagaggaggttttggaggtagaaatggg
tcagagagaggaggctatggtggtagaggaagatctgacagagggggattcgggggtaga
ggtcggtcagacagaggaggttttggaggtagaggtggttctgacaggggaagttttgga
ggtagaggtagatcggacagaggaggatttggcggcagagggaggagggataatagcagt
gattggaataacaatgattctggtgaagataaggcctttgactggaagaatggggcaaac
aacagtggaggatggaaaactagtggtggaggcagttggaaacaaggaggagatgataag
ggccaatttgagagttggaattctggaagtggtgcaacgggaaatcaacctggtggttgg
agtagtctgggttctggctggaatcaatcagcaaagactggaggcagtgaagctggtggt
tggaacaagggaggtgattcaaatagtgaagctgctgggaaggcaggtaacaactggaac
tcagattcttctggtggtggtcggaggactagctggaatcaatcaagtcaggaagggaga
gtttctaatgatgtaggtgacggctggaagaaagaacaggattctaatgctcagggtcag
ggtggtggctggggtagccaagggggatggagtaaaggagctggttcaggaaatacagac
acaagtggagatcaggttaagatttggaattcctctagcggaggtcaatcttctggatgg
agtcaatcgaaggaggcaaaagaaggaactaatgctggtggggaaccaactgatccatgg
ggtaaagcatcagcgagcaattggggaaacaagggagatggtggcagtagcaaaggtggt
tggtag
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integrated database retrieval system
