Ricinus communis (castor bean): 8259063
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Entry
8259063 CDS
T01087
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8259063
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
90S particles
Other 90S particles
8259063
Pre-60S particles
Other pre-60S particles
8259063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
TOR1L1_N
HEAT_GCN1
TSEN34_N
Motif
Other DBs
NCBI-GeneID:
8259063
NCBI-ProteinID:
XP_015572954
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All DBs
Position
3:complement(29117436..29126795)
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AA seq
1282 aa
AA seq
DB search
MEDVEVDDFSTISTTTDDFCELIISRFSTSPQENHQHLCTVIGAMSQELKDQNLPSTPIA
YFGAVCSSLDRLSSDNNNHPPSHAIDSLITILSLSLPRISVPILKKKRDFLSELIVRVLR
VNSLTIGAIVSALKCISHILSIKDTINWSDVSQLYNFLLGFIIDSRSKVRMQANACTRDV
LHSFQGTSLLAPASEGITNTFERFLLLAGGSNSANENEGPRGGAQEVLHILDTLKECLPL
MSIKCKTTILKYYKTLLELRQPVVTRRITDSLNVICLHPTSDVSAEVLLELLCSLAMLVS
SNETSVDSMTFTARLLDVGMRKVYNLNRKICVVKLPLVFSTLKDILASEHEEAIFAAMEA
LKSLINNCIDESLIKQGVDQIMTNKNLDSRKSGPTVIEKVCATIESLLDYHYSAVWDMVF
QVVSTMFHKLGNHSSYFMKGTVKNLADMERLSDDDFPYRKQLHECLGSALVAMGPETFLN
LLPLKIEANDLSEVNVWLFPILKQYTVGAQLSFFTETVLGMIGHMRKKSQKFEQEGRVVS
ARNADALIYSLWSLLPSFCNYPLDTAESFKDLQQVLCSALREEHDICGIICSALQILIQQ
NKKNAEENDDPIVIEVDIARQRAMARYSPQVTASNLSVLRESAFEFLTVLSGILLESSKD
DGGCLQSIIREFASIADKKVVKRIFIRSMRKLLDVTQKVTKSEGSGKSNSMQTDDSSNVK
PPSLERARLFDLAVSVLPGLDVEEIGVLFSALKPALQDAEGLIQKKAYKVLSIIIQRCDE
FVSSRLEELLQLMIDVLPSCHFSAKRHRLDCLYFLVVHICKGNSEQKQRDILSSFLTEII
LALKEANKKTRNRAYEVLVQIGHACGDEENGGNRENLYQFFNMVAGGLAGETPHMVSAAV
KGLARLAYEFSDLVSTAYKLLPSTFLLLQRKNREIIKANLGLLKVLVAKSQSDGLQMHLG
SMVEGMLKWQDETKNHFRAKVKHLLEMLVRKCGLDAVKAVMPEEHMRLLTNIRKIKERKE
KKLAGNSEEARSHLSRATTSRSSRWNHTKIFSDFGDEDTQDDDAEYMDIKTVSGRQSKSS
QLKSKASLRSKRIRKSDKSLPEDLDQIEDEPLDLLDQRKTRSALRASEHLKRKQESDNEM
EIDSEGRLVIREAGKLKKEKPSNPDSDGRSEVGSYNTVSSSRKAQKRQKTSGSGWAYTGN
EYASKKAGGDLKKKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVVKMTKKLEGKSAS
GALSMKFMRFKTQKKGNKRKSK
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtcgaagtggatgatttctctacaatttccacaacaacagacgatttctgc
gaattaattatctctcggttctccacttctccacaagaaaatcaccagcacctatgcaca
gtaatcggcgccatgtcccaggaactcaaggaccaaaacctgccgtccacacccatcgct
tacttcggcgctgtttgctcctctctcgaccgcctctcttccgacaacaataaccaccct
ccctctcacgccatcgattctcttatcacgatcctctctctttccctcccaagaatttcg
gttcctatattaaagaaaaaacgagatttcttatcagaactgattgttagggttttaagg
gtgaattcgttaacaattggtgcaattgtttcggctttgaaatgtatttctcacatctta
agtattaaagatacaattaattggagtgatgtttctcaattatacaactttttgctgggg
tttattatcgattcgcgttcaaaggttagaatgcaagcaaatgcatgtacacgtgatgtg
ttacacagttttcaaggaacgtcattattggcaccagcgagtgaagggattactaataca
tttgaaaggtttcttcttcttgctggtggatcaaattctgctaatgagaatgaagggccg
cgaggaggagctcaagaggttcttcatattcttgatactttaaaggaatgtcttccactt
atgtctatcaagtgcaagactactattctaaagtattacaagacccttcttgaattgcgc
caacctgttgttactaggcgtataactgatagtttaaatgtaatttgtttacaccctact
tctgatgtttctgcagaagtgttgcttgagcttttatgctcattggctatgttagtgtca
tcgaatgagacatctgttgatagtatgactttcactgctcggttgttggatgttgggatg
agaaaagtatataacttgaatagaaaaatttgtgtggttaagctacctcttgtatttagc
acacttaaagatattttggcctctgaacatgaggaggccatatttgcagcaatggaagca
ttgaagagtttgataaataattgcattgatgaaagcttgattaaacagggtgtagatcag
attatgacaaataaaaacctagactctagaaagtctgggccaacagttatcgaaaaagtg
tgtgcaactattgagagcttacttgattatcattatagtgcagtgtgggacatggtattt
caagttgtttcgacaatgtttcataaattaggcaaccactcttcatattttatgaaagga
acggttaagaacttggcagacatggagagattgtcggatgatgattttccgtacagaaaa
cagttgcatgaatgccttggatcggctcttgttgcaatggggcctgaaacattcttgaac
ctcctacctctcaaaattgaggccaatgacttatccgaggttaatgtttggctctttcct
attttgaagcagtatacggttggtgcccagttaagcttctttacagagactgttctgggc
atgattggtcatatgagaaagaagtcccaaaaatttgagcaagaaggacgagttgtctct
gcaaggaatgctgatgcactcatatattctttgtggtccttgttaccttctttttgcaac
tatcctttggatactgcagaaagctttaaggatctacaacaagttctatgtagtgctctt
cgtgaagaacatgatatttgtggaataatatgctctgctctgcagattctgatacaacaa
aacaagaaaaatgctgaagaaaatgatgatccgattgttattgaagttgatattgccaga
cagcgagctatggcccgctatagcccccaggttacagcaagtaatttgagtgtgctaagg
gaatctgcttttgagtttttgactgtcttgtcagggattcttttggaatcttcaaaagat
gatggtggctgtttgcagtctataatcagagagtttgcttcaatagctgataagaaagta
gttaagaggatattcataaggtcaatgaggaagcttttggatgttacgcaaaaggtgact
aaatctgaaggttctggaaagtctaattctatgcagactgatgactcatcaaatgtaaag
ccaccatcacttgagagggcaaggctatttgatttggctgtttctgttttgcctggcttg
gatgtcgaagaaattggtgttctattcagtgcgctaaagcctgctttacaggatgctgag
ggtttgatccagaagaaagcatacaaagtcctttcaatcattatccagaggtgtgatgaa
tttgtttcatcaaggcttgaggaactgcttcaactaatgattgatgtcctgccttcttgc
catttttctgccaaacggcacagacttgactgtttgtactttctggttgtccatatctgc
aagggaaattcagagcaaaagcagcgtgacattcttagttctttcctaactgaaataatt
cttgccctgaaagaggctaacaaaaagacgaggaatagggcttatgaagtgcttgtccaa
attggccatgcctgtggagatgaagagaatgggggaaatagagagaacctgtatcaattt
tttaacatggtggctggaggcttggctggagaaactcctcatatggttagtgctgccgtg
aaaggtttagctcgtctggcttatgagttctcagaccttgtttctactgcttacaagttg
cttccatccacatttctactgctccagagaaagaaccgagaaatcattaaagctaattta
ggcttgttaaaggttctggttgccaaatcacagtctgatgggctacaaatgcacttggga
agtatggtggaaggcatgctgaagtggcaagatgagaccaaaaaccatttcagagctaag
gttaagcatctactagaaatgcttgtgaggaagtgtggtctggatgctgtgaaagcagtg
atgcctgaagaacatatgagacttcttactaacattcggaagataaaggagcggaaagag
aagaagcttgcaggtaactctgaggaagctagatctcatctgtcaagggcaaccacatcc
aggtcaagtagatggaaccacacaaaaatattctctgattttggcgatgaagacacacag
gacgacgatgctgaatatatggatataaagactgtttctggtcgtcagagcaagtcctca
cagctcaaatccaaagcttcattgcggtccaagagaatacgcaagtcagataaaagcttg
ccagaagacttggaccagatagaagatgagccacttgatttgcttgatcagcgtaaaacg
aggtcagctcttcgcgcatcagaacatctgaaaaggaagcaggaatctgataatgagatg
gagatagactctgaagggagattggtaattcgtgaggcgggaaagttaaagaaggaaaag
ccctctaaccctgactcggatgggaggagtgaagtgggcagttataatactgtgagctcc
tcaaggaaagcccaaaagcgtcaaaaaacatctggatctggatgggcttacactggcaat
gaatatgccagcaagaaggctggtggtgacttgaaaaagaaggacaagcttgaaccatac
gcgtattggccccttgaccgcaagatgatgagccgtagacctgagcatcgtgcagctgct
aggaaaggtatggcgagtgtggtgaaaatgactaagaagcttgagggcaagagcgcttca
ggtgcactttccatgaagtttatgagatttaagacacaaaagaaaggaaataagagaaaa
agcaagtga
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