Ricinus communis (castor bean): 8259099
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Entry
8259099 CDS
T01087
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00061
Fatty acid biosynthesis
rcu00071
Fatty acid degradation
rcu01100
Metabolic pathways
rcu01212
Fatty acid metabolism
rcu04146
Peroxisome
Module
rcu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8259099
00071 Fatty acid degradation
8259099
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8259099
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcu01004
]
8259099
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8259099
Enzymes [BR:
rcu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8259099
Lipid biosynthesis proteins [BR:
rcu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8259099
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of breast milk
8259099
Exosomal proteins of breast cancer cells
8259099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
8259099
NCBI-ProteinID:
NP_001310618
UniProt:
A1X860
LinkDB
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Position
9:complement(2725063..2733382)
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AA seq
694 aa
AA seq
DB search
MDMDSAQRRIQAIHGHLLAARDCSPSHLRLNPTAGEFFSEQGYSVVLPEKLQTGKWNVYR
SARSPLRLVSRFPDHPDIGTLHDNFARSVDTFRDYKYLGTRIRVDGTVGEYKWMTYGEAG
TARTAIGSGLMHHGIPKGSSVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFI
VNHADVQAIFCVPQTLTPLLSFLSEISSVRLIVVVGGMDDQMPSLPSSTGVQVVTYSKLL
SQGHSNLQPFCPPKPEDVATICYTSGTTGTPKGAALTHGNLIANVAGATLATKFYPSDIY
ISYLPLAHIYERANQVLTVYYGVAVGFYQGDNLKLMDDMAALRPTIFCSVPRLYNRIYAG
ITNAVKTSGGLRERLFNAAYNAKKQAILNGRSPSPMWDRLVFDKIKAKLGGRVRFIASGA
SPLSPDVMEFLKICFGGRVSEGYGMTETSCVISAMEEGDNLTGHVGSPNPACEIKLVDVP
EMSYTSDDQPYPRGEICVRGPIVFQGYHKDEAQTRDVIDEDGWLHTGDIGLWLPEGRLKI
IDRKKNIFKLAQGEYIAPEKIENVYAKCRFIAQCFVYGDSLNSALVAIVAVDQDTLKAWA
ASEGIKYENLGQLCNDPRARAAVLADMDAVGREAKLRGFEFAKAVTLVLEPFTMENGLLT
PTFKIKRPQAKAYFQNTISKMYEELATSDPSPKL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacatggattcagctcaacgtcggattcaagccattcacggccatcttctcgccgcc
agagactgttctccttctcacctccgtctcaatccaacagctggcgagttcttctctgag
cagggttacagtgttgtgcttccagagaaattacagacaggaaaatggaatgtctacagg
tctgcccgttctcctttgaggcttgtaagcagatttcctgatcatcctgacattggtaca
ttgcatgataattttgcgcggtcagttgatactttccgggattacaaatatttgggtaca
cgaattcgggttgatggaacagttggagagtataaatggatgacatatggagaggcgggt
actgcacgaacagctataggttctggcctaatgcatcatggaataccgaagggatcttct
gttggattatattttatcaacaggccagaatggctcatcgttgatcatgcctgctcagcg
tactcttatatatcagttcctttatacgacactcttggtccagatgctgtcaagtttatc
gttaatcatgctgatgtacaagctatattttgcgtaccccagactttgactcctttgctg
agcttcttgtctgaaatttcgtccgtacgtctgattgtggttgttggaggaatggatgat
caaatgccatctcttccatcatcaactggagttcaggttgtaacatattcaaaactactt
agtcagggccacagtaatcttcagcctttttgccctccaaaacctgaagatgttgctaca
atttgctatacaagtggtacaacaggaacaccaaagggagctgcattgacccatggaaac
ctgattgcaaatgttgctggggccacacttgctactaaattctacccatcagatatttac
atatcatatctgcctcttgcacacatttatgaaagggcaaatcaggtcttgacagtatat
tatggagttgctgttggattctatcagggggataatctgaaactcatggatgatatggct
gctctaagacccaccatcttctgcagtgttcctcggttatataatagaatatatgctggt
atcactaatgccgtgaagacatctggtggactacgggagaggttatttaatgctgcatac
aatgctaagaagcaagcaattctgaatggcaggagtccttctccaatgtgggacagattg
gtattcgataagataaaggcgaaacttggtggacgagttcgtttcattgcgtctggtgct
tcacccttgtctcctgatgtcatggagttcttgaagatttgctttggtgggcgtgtaagt
gaaggatatggaatgactgagacttcttgtgttataagtgctatggaagaaggtgacaac
ctaactggacatgttggctctcctaatccagcctgcgaaataaagcttgtagatgttcca
gaaatgagctacacatctgacgatcagccatatcctcgtggtgaaatctgtgtgaggggc
cccattgtatttcaaggatatcataaagatgaagcacagacgagagatgtaattgatgaa
gatggatggcttcatactggagatatcggattatggttacctgaaggtcgtctgaagatc
attgatagaaagaagaacatttttaagctggcgcaaggagagtacatagctccagagaaa
attgagaatgtatatgctaaatgcagattcattgcccagtgctttgtgtatggggatagc
ctgaattctgctttggtagccatcgtcgcggtcgaccaagatacactgaaagcatgggct
gcttctgaaggcattaagtatgaaaatctggggcaactatgcaatgatccaagagcaagg
gctgctgtgcttgcagacatggatgctgttggaagagaagctaagctacgaggtttcgaa
tttgcaaaagctgtgactctggtgctggaaccatttacaatggaaaatggtctgctgact
ccaacatttaagattaagagaccacaagcaaaggcatactttcagaacacgatatcaaaa
atgtatgaagagctggctacgtccgatccctccccgaaactgtag
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