Ricinus communis (castor bean): 8259745
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Entry
8259745 CDS
T01087
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8259745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8259745
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
8259745
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
8259745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
8259745
NCBI-ProteinID:
XP_002527306
UniProt:
B9SMT7
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All DBs
Position
8:11313345..11315092
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AA seq
274 aa
AA seq
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MSLLLKGDSIQIREVWNDNLEEEFSLIREIVDEYSYIAMDTEFPGIVLRPVGNFKNSNEY
HYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL
LRQSGIDFKKNNERGIDAMRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNLP
DTQLGFFNLINMYFPTLYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA
CTFRKLKENFFSGSLEKYAGVLYGLGVENGQSTH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttgttaaaaggggattctattcagattcgcgaggtttggaatgataatctt
gaagaagaattttctcttattcgtgaaattgttgatgagtattcctatatagctatggac
accgagtttccaggcattgtgttgcgtcccgtaggaaatttcaagaatagtaatgagtat
cattatcaaactttgaaggataacgttgatatgttgaagttgattcaattgggtcttaca
ttttcagatgagcaaggaaacttacccacgtgtggaactgataaatattgcatttggcag
ttcaatttccgtgaatttaatgtgaatgaggatgtttttgcaaatgattcgattgaactt
ctgcggcaaagcgggattgattttaagaagaataatgaaaggggtattgatgctatgcga
tttggtgagctgttgatgtcatcagggattgttttgaatgatagtgtgcattgggtaact
ttccacagtggttatgattttggttacttgcttaagctcttgacatgccagaatttgcct
gatacacaactggggttctttaacttgatcaatatgtacttccccaccctatatgatatc
aagcatttgatgaagttttgcaatagccttcatggagggttgaataagcttgcagagttg
ttggaagtggagagagttgggatatgtcatcaagcaggttcagatagtttgctcacagct
tgtacattcaggaaattaaaagagaacttctttagtggctccttggaaaagtacgccggt
gtgttgtatggtttaggtgttgagaatggacagagtactcattga
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