Ricinus communis (castor bean): 8259758
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Entry
8259758 CDS
T01087
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8259758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8259758
03036 Chromosome and associated proteins [BR:
rcu03036
]
8259758
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8259758
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
8259758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
8259758
NCBI-ProteinID:
XP_002527319
LinkDB
All DBs
Position
8:11231540..11238223
Genome browser
AA seq
1067 aa
AA seq
DB search
MASPSLLPASESFGELRSTTLSAPFDISCKSDCEVGVFSLQTQYKKRRLSPNNDDVSCEI
SREIESSLPTLCSTDYYMEPSLTDLVAHELIDPGYCRRVPDFIVGRLGFGCVKFLGTTDL
RWLDLDKIVKFRRHEIVVYEDDSDKPQVGQGLNKTAEVTLNLQIRLSDLNKRQLNNAVKK
LKESAARQGAYFISFHPENGQWKFLVNHFSRFGLSDDEEEDIAMDDVVAVEEPIEMGGTP
ETNEETQVELDPTGPMLYHSLPAHLGLDPVKMKEMRMLMFPVEEEEEVEHFNGPSRQKLS
SGKEHIKHSLHNSSQKISQRSNTPVMRKMPLALLDYRPSSFNSSSPGAILMAQQNKGLPL
KTVKGEGFKLNLEHETPMTGSYSRNIVDAGLFMGRSFRVGWGPNGVLVHSGAPVGCNGTQ
RLLSSVINVEKVAFDRVVRDEDNKASKDLVEFAFDCPLNLHKTINHETKEVEVGSFKLKL
QKVVSNRKMLSEICRSYIDIIERQLEVPRLSSPARLVLMHQVMVWELIKVLFSERENSGQ
SKSMGADNEEDMMQDIKEGSLEIDQESLPLIRRAEFSCWLQESVCHRVQEEVSSLSESSH
LEHILLLMTGRQLDGAVEIAVSRGDVRLACLLGQAGGSMVNRTDVARQLDLWRNNGLDFN
FIEKERIRLYELVSGNIHNALDGVKIDWKRFLGLLMWYRLASQTSLPIIFQTYQHLLNDG
KAPYPLPIYIDEGPAEEAVNFSGRHFDLSYYLMLLHAKGDGEIGYLKTMFSAFSSTNDPL
DYHMIWHQRAILEAVGILTSNNLQVLDIGLVSQLLCIGQCHWAIYVVLHMPYRDDYPYLQ
ATVIREILFQYCEIWSLDESQRQFIENLDIPRAWLHEAMAVYFNYHGNLLKALEHYLECE
NWQKAHSIFITSVAHTLFLSANHSEIWRLTTSMEDHKSELENWDLGAGIYLSFYLIRSSF
QEGYNNTSELDSFESKNSACRDFLSHLNESLEVFGDRLPVDARVAYSKMAEEISEMLLHY
ACEGSTRDAQLSCFDTIFGAPVPEDLRSNYLQDAVSLFTCYLSEMAA
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccttctctcctaccggcttccgagagtttcggtgaacttcgaagtacgaca
ctcagtgctccttttgatatttcttgcaaatcggactgtgaagttggggtttttagttta
cagactcaatacaagaaaagaagattatctccaaacaatgatgatgtatcatgtgagatt
tcaagagagattgaatcttcattaccaacattgtgctcaacagattattatatggaacct
tccttgactgatttggttgcccatgaacttattgatcctggatattgtagacgagttccg
gattttattgttggtagattaggttttggatgtgttaagtttcttggaacgactgatctt
aggtggctggacttggataagattgtgaaatttcgtaggcatgaaatagttgtatatgaa
gatgatagtgataagcctcaagttggtcagggtcttaacaagactgctgaagtgactttg
aatttgcaaataagattgtctgatttaaataagaggcagctcaataatgctgtgaagaaa
ttgaaggagagtgcagcgaggcagggagcttattttatatcattccatccagaaaatggt
cagtggaaatttttagttaaccactttagcagatttggattaagtgatgatgaggaggaa
gatattgcaatggatgatgttgtagcagttgaagaacccattgaaatgggtgggactcct
gagacaaatgaagaaacccaagtagaattagatccaactggacctatgctttatcattct
cttcctgcacatcttggccttgatcctgtaaaaatgaaagagatgagaatgttgatgttt
cctgttgaagaagaagaggaggttgagcatttcaatggtccttcaaggcagaaattgtcc
tctggtaaagaacatataaagcattctttgcacaattcctctcagaagataagccagaga
tctaacactcctgttatgaggaaaatgccactggctctgcttgattacagacctagtagt
tttaattccagttccccgggtgccattttgatggcccagcaaaataagggcctgccttta
aagacagtaaaaggagaaggatttaaactgaaccttgagcatgagacaccaatgactgga
agctattctcgcaacatagttgatgctggtttgttcatgggtaggtcatttcgtgtgggg
tggggtccaaatggggtccttgttcactctggtgctccagttggatgtaatggaactcag
aggctattatcttctgtaattaatgttgagaaggttgcatttgacagagtggtgagagat
gaagataacaaagctagtaaggatctagttgagtttgcttttgactgtcctttgaatctt
cacaagactataaatcatgaaacaaaagaagttgaggtgggatcctttaaactaaagctt
caaaaagttgtctctaatcgcaaaatgctttcagagatttgtcggagttatatagacatc
attgagaggcagttggaggttcctcggttatcatcaccagcacggttggttttgatgcat
caagttatggtctgggaattgataaaagttcttttttctgaaagggaaaatagtggacag
tcgaaatctatgggtgctgacaatgaggaggatatgatgcaggatataaaggaaggttct
ttggaaattgaccaggaatcacttcctcttatccgaagagcagagtttagttgttggttg
caagaaagtgtttgccaccgtgtccaagaggaagtgagctctttgagtgaatccagtcat
cttgaacacattctcttactcatgactgggcgacaactggatggagctgtggaaatagcc
gtctctagaggagatgttagactggcttgtttgttaggtcaagctggtgggtccatggtg
aaccgcactgatgttgcacggcagcttgatctttggaggaacaatggactagacttcaat
ttcattgagaaggaaagaataaggctgtatgagttggtttctggtaatatacataatgca
ttggatggtgttaagattgactggaagaggttcttaggtttattgatgtggtatcgctta
gcatctcagacatctttgcccattatttttcaaacttatcagcatcttctcaatgatggt
aaggctccatatcccctgcccatttacattgatgaaggaccagcagaggaggctgttaat
ttctcagggagacactttgacctctcatattatcttatgcttcttcatgccaaaggagat
ggtgaaattggctatctaaagaccatgttcagtgccttctcttcaacaaatgacccactt
gactaccatatgatctggcatcagcgagccatattggaagctgttggcattttgacttct
aacaatcttcaagttcttgacattggacttgtttcccagcttctatgtattgggcaatgc
cattgggcaatctatgtggtccttcacatgccttaccgtgatgattatccatatctccaa
gctacagttattcgggaaattttatttcagtactgtgaaatttggagtttagatgaatca
caacgccaatttattgagaacctcgacattccacgagcatggttgcatgaagctatggct
gtttacttcaattaccatgggaatctcttgaaggccctcgaacattatcttgaatgtgaa
aattggcaaaaggctcattcgattttcataacctcagtcgcccatacattgtttttatca
gccaatcattccgagatatggaggcttacaacttcaatggaggaccacaaatctgaactt
gaaaattgggacttgggagctggaatttatttatcgttctatttgatacgaagttcattt
caggaaggctacaataatacaagtgaactggattcttttgagagcaaaaattctgcctgc
agagacttcctaagtcatctgaatgaatctttggaggtttttggtgaccgtttaccagtt
gatgcaagagtagcatactcgaaaatggcagaggagataagtgaaatgcttctacattat
gcctgtgagggctcaacacgggatgctcagttaagttgctttgacacaatatttggtgct
ccagttcctgaagacctccgctcaaattatctgcaggatgctgtctctctctttacatgt
tatctttcagagatggctgcttag
DBGET
integrated database retrieval system
