Ricinus communis (castor bean): 8259794
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Entry
8259794 CDS
T01087
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X2
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00906
Carotenoid biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
8259794
Enzymes [BR:
rcu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
8259794
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
HI0933_like
Thi4
GMC_oxred_N
Pyr_redox_2
FAD_binding_3
MCRA
AlaDh_PNT_C
Motif
Other DBs
NCBI-GeneID:
8259794
NCBI-ProteinID:
XP_002524099
UniProt:
B9SDN0
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Position
10:17586059..17591093
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AA seq
617 aa
AA seq
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MSLAFSSTVQFGSFGPRSQKHGFFSFETSKVSYLFNLSNINSGWLCNSTSRNLEYRSASF
NSNNKFRSCKVKRNLALRTKSVLSVNKKVDIQGNRGVSKFDAIVIGSGIGGLVAATQLAV
KGARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGRKMEV
IPDPSTVHFHLPNNLSVRVHREYSDFVSELITRFPHEEQGILKFYGECWKIFNALNSLEL
KSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDVARKYIKDPELLSFIDAECFIVSTVNA
LQTPMINAAMVLCDRHFGGINYPVGGVGGIAKSLVNGLVDQGSEILYKANVTNIILEHGK
AVGVRLSDGREIFAKTIISNATRWDTFGKLLKGEKLPQEEENFQKVYVKAPSFLSIHMGV
KAEVLPPDTDCHHFVLENDWARLQEPYGSIFLSIPTVLDPSLAPAGHHILHIFTTSSIED
WEGLPVKDYEAKKQLVADKIIGRLEKELFPGLRSSIAFMEVGSPKTHRRYLARDKGTYGP
MPCRTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSP
VMDAALLRLLGWLRTLA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagctttcagtagcacagttcaatttggtagttttggacccagaagccagaaa
catggatttttctcttttgaaacttccaaagtctcataccttttcaatctcagtaacatc
aattcagggtggttatgcaattccacgtccagaaatttagaatatagaagtgcaagtttc
aatagtaataacaagtttaggtcttgcaaggtgaagaggaacttggctttgaggacaaag
tcagtgttgagtgtgaataaaaaagtggatatacaggggaatagaggagtaagcaaattt
gatgctattgttattggttctgggattggtggtttggttgctgctacacagctggctgtg
aagggagctagggttttggttttggagaagtatgtgattcctggtgggagctctggttat
tatgagagggatggttatacttttgatgttgggtcttcagttatgtttggcttcagtgat
aagggcaacctaaatttgataacccaagcattggcagcagttggtcgtaagatggaggtg
attcctgatccaagtactgtccatttccatctacccaataatctttctgttcgagttcac
agagagtacagtgactttgtctcggaacttattactagatttccccatgaagagcaaggg
attcttaaattctatggtgaatgttggaagatattcaatgccttaaattcattggaattg
aagtcactggaggagccaatttacctgtttgggcagttctttcagaagcctcttgaatgc
ttgacactggcttattacctgccgcaaaatgctggagacgtagctcgaaaatacataaag
gaccctgagttattatcttttattgacgcggagtgttttattgtcagcacagttaatgcg
ttgcagacaccaatgattaatgcagccatggtcctatgtgataggcattttggaggaatt
aactatcctgttggtggtgttggtggaattgcaaagtctttggtgaacggtctggttgat
caggggagtgaaattctgtacaaggcaaacgtgactaacattatactggagcatggaaag
gctgtgggagtgaggctgtcagatggaagagagatctttgccaaaaccataatatcaaat
gctactagatgggatacctttgggaagttgttaaaaggtgaaaagcttccacaagaagaa
gagaactttcagaaagtttatgtcaaggctccatcctttctttccattcacatgggtgtt
aaagctgaggttctgcctccagatacagattgccatcattttgtgcttgagaatgactgg
gcgagattacaggagccttatggcagtatatttttaagcattccaactgtcctcgatcca
tcgctagcccctgcagggcaccatattcttcacatattcacgacttcttcaattgaagac
tgggagggactccctgtaaaggattatgaggcaaagaagcagctggttgcagacaaaatt
ataggcagattggagaaggaactgtttccagggctcagatcatcaattgcttttatggag
gtggggtcacccaagacacacaggcggtatctagctcgtgataaaggtacttatggacca
atgccatgcagaactcctaaaggcttattgggaatgccattcaatacaacagctatagat
ggtctttactgtgttggagatagctgttttccaggacagggtgtaatagctgtagccttt
tcaggagtaatgtgtgctcatcgtgtagctgctgatattggactggagaaaaagtcccct
gtaatggatgctgctctccttcgacttcttggctggttaaggacattggcatga
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