KEGG   Ricinus communis (castor bean): 8259846
Entry
8259846           CDS       T01087                                 
Name
(RefSeq) sm-like protein LSM4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03018  RNA degradation
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8259846
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8259846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8259846
   03041 Spliceosome [BR:rcu03041]
    8259846
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8259846
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     8259846
Spliceosome [BR:rcu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    8259846
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 8259846
NCBI-ProteinID: XP_002523061
UniProt: B9SAP2
LinkDB
Position
1:7678428..7693705
AA seq 147 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRSDRKPPGVGRGRGRGREDGGRPVKGIGRGLDDGS
AKAAGGRGRGGSGGKPGGNRGAGRGRG
NT seq 444 nt   +upstreamnt  +downstreamnt
atgcttcccctttctcttcttaagactgcacaaggccatcccatgttggttgaacttaaa
aatggagagacttacaatggacatttggtcaattgtgatacttggatgaacattcatctc
cgtgaagtcatctgtacctctaaggatggagatagattttggagaatgcctgaatgctat
atacgcgggaatactattaagtatctccgagtacctgatgaggtgatcgataaagttcag
gaagaaaccaagagccgttcagaccggaagccacctggcgtaggccggggaagaggaaga
ggccgagaagatggtggaaggccagtgaaaggaattgggcgtggtctggatgatggaagt
gctaaggccgcaggtggacggggcagaggtggttcaggtggaaagccaggtggaaacaga
ggcgcagggagaggcaggggctga

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