Ricinus communis (castor bean): 8259902
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Entry
8259902 CDS
T01087
Name
(RefSeq) exopolygalacturonase clone GBGE184 isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Module
rcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8259902
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
8259902
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
8259902
NCBI-ProteinID:
XP_015577218
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Position
1:8059897..8063286
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AA seq
414 aa
AA seq
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MAITCRFEVKAIHVVLGLALFSCLANGVALRHRRDLVEDTGGSLTVFDVTQFGAKADDKT
DNAIAFIKAWKEACNSKTPAKVLIPKGNFVMGPAVFQGPCQSKVTFELLGIVKATTDLSD
YSSPEWISFERITGLTLKGDGTFDGQGESAWKYNDCANTGDCAALPDQLKFFNVKDSDVS
GITSLNSKYFHYHVVSCSNVNFHDLKITAPGESPNTDGMHISKSSSIKVINSIIGTGDDC
ISIGQGTNDLTVNKVTCGPGHGISVGSLGKYQNEEDVTGIVVTDCTFTGTTNGARIKTYP
GSQASKASTIIFEDITMKDVKNPIVIDQFYGSKSSQPSKVKLSDVHFRNIKGSTVSMVAV
DLKCSPAAPCDDVELSDIDFTYAGTKKGTGELSTSCSNAKVTAAGKLNPGTCPI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggccattacatgtaggttcgaggttaaggctattcatgtagtactaggcttagctttg
ttctcttgtttggccaatggtgtagcactccgccatagaagagaccttgttgaggatact
ggtggttcattgactgtttttgacgttacacaatttggcgctaaagcggatgataagacc
gataacgcaattgcatttataaaagcatggaaggaggcatgcaattcaaaaaccccggca
aaggttctaattccaaagggaaatttcgtgatgggtcctgcagtatttcaaggaccttgc
caaagcaaagtcacttttgaactgctaggcattgttaaagcaacaactgatctcagcgat
tactcttcaccagaatggatctcattcgaaagaatcactggtttaactttgaagggtgat
ggcacattcgatggtcaaggtgagtctgcttggaaatataatgactgcgctaacactggc
gattgcgctgctcttcctgatcaactgaaattctttaatgtgaaagattctgatgtttct
gggatcacatctctcaatagcaaatacttccactatcatgttgtatcctgcagcaacgtg
aatttccacgacctcaaaataactgctcctggagaaagcccgaacaccgatggcatgcat
attagcaaatccagttctatcaaagttattaactccattattggcactggcgatgattgt
atctctatcggacaaggaaccaacgatcttaccgttaacaaagttacttgcggaccggga
catggcatcagtgttggaagccttggcaagtatcaaaatgaggaggatgtaaccgggatt
gttgtgactgactgtacatttacaggcactacaaatggtgctagaatcaaaacataccct
ggatcacaagctagcaaggctagcaccatcattttcgaagatatcacaatgaaagatgtg
aaaaatcccatcgtaatagatcaattttatggttccaaaagctctcagccgtcaaaagtt
aagctgagcgatgttcatttcagaaacattaagggctccacagtttcgatggtggctgtg
gatttaaagtgcagcccagctgccccttgtgacgatgtagaactttctgatatagatttc
acctacgcaggcactaaaaaggggactggagagctctcaacctcatgttcgaatgcaaaa
gttacagccgctggaaaattgaatccaggaacttgtcctatataa
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