Ricinus communis (castor bean): 8260139
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Entry
8260139 CDS
T01087
Name
(RefSeq) ras-related protein RABF1
KO
K07887
Ras-related protein Rab-5A
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04144
Endocytosis
rcu04145
Phagosome
rcu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8260139
04145 Phagosome
8260139
04148 Efferocytosis
8260139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8260139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8260139
04031 GTP-binding proteins [BR:
rcu04031
]
8260139
Membrane trafficking [BR:
rcu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
8260139
Endosome - Lysosome transport
8260139
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8260139
Exosomal proteins of other body fluids (saliva and urine)
8260139
Exosomal proteins of colorectal cancer cells
8260139
Exosomal proteins of bladder cancer cells
8260139
GTP-binding proteins [BR:
rcu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
8260139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
AAA_16
TniB
Motif
Other DBs
NCBI-GeneID:
8260139
NCBI-ProteinID:
XP_015581116
LinkDB
All DBs
Position
6:25218519..25224134
Genome browser
AA seq
201 aa
AA seq
DB search
MGCASSLPDRNSGRLGGLNNSDNNGVSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTIGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPD
SFNKAQYWVKELQKHGSPDIVMALVGNKADLHDNREVPVQDGKEYAEKNGMFFIETSAKT
ADNINQLFEEIAKRLPRPSPS
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtgcctcttctcttccagataggaattctgggaggttaggtggtctcaacaat
tctgataacaatggagtgtctgatgcaaaaaacctacgtgttaagctggtattattaggt
gattctggtgttggtaaaagctgtattgttcttcgctttgttcgtggtcaatttgatcca
acgtccaaggttacaatcggagcgtcatttttatctcagacaatagctttgcaagattct
acaacagttaaatttgaaatatgggacactgcaggacaagaaaggtatgctgcattggct
ccactttactacagaggtgctgcagttgctgttattgtgtatgatataacaagcccagat
tcctttaacaaagcacagtattgggttaaggagctacagaaacatgggagccctgatata
gtcatggctttagttgggaacaaagctgatcttcatgacaaccgagaagtacctgttcaa
gatgggaaagagtatgcggagaagaatgggatgttctttattgagacatctgcaaagact
gctgataatataaatcagctgtttgaggaaattgctaagcgactcccccgtccgtctcca
tcatga
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