Ricinus communis (castor bean): 8260151
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Entry
8260151 CDS
T01087
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Module
rcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8260151
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
8260151
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
WHD_Sfc3_5th
FimD_3rd
Motif
Other DBs
NCBI-GeneID:
8260151
NCBI-ProteinID:
XP_002529616
UniProt:
A0ACK6BGU4
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Position
10:19504573..19508358
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AA seq
474 aa
AA seq
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MALQKPPFNNLYSLFFLVNILSFIIVMTIPSYNCLQHHDTLNDYLQEASGYGSPHHHHHH
QQEAYPSYFSSIDDGQSNNEDLILMRANVLDLNIFDKVGTTSTSAKTFSVDAFGAKADGS
DDTKAFQEAWKAACSSAGSVLVVPDNNYLIKPIRFSGPCKSNLTLQIYGTIEASDDRSDY
EEDDRHWIVFERVQNFLVEGGGTIDGNGKIWWQNSCKLNKDLPCKDAPTALTFYKCKNLV
VENLKIQNAQQMHVSFQGSKNVKISNLIVTSPEESPNTDGIHVTSTQNIQITDCVIGTGD
DCISIVSGSQNVQAMNITCGPGHGISIGSLGSGNSKAHVSGVTINGAKLSGTTNGVRIKT
WQGGSGNASNIKFQNIKMDNVSNPIIIDQNYCDQDKPCKEQKSAVQVKDVVYKNIKGTSA
SHVAIKFDCSNSHPCEGILLQDVSLERQRGDETAIALCNNVDVAQVGVVSPHCP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggctttacagaaacccccatttaataacctctattccttattcttcctcgttaatatt
ctctctttcattattgttatgaccattccatcttacaattgtctgcaacatcatgacacc
cttaatgattacctccaagaagcatctggctatggttctcctcaccatcatcatcatcat
caacaagaagcttatccttcctattttagctcaattgatgatggacagtccaataatgag
gacttgatcttgatgagagctaatgttctcgatttgaatatatttgacaaagtaggcacc
acatcaacttcagctaaaacattcagtgttgatgcctttggagctaaggctgatggatct
gacgatacaaaggcatttcaagaggcctggaaagcagcttgttcgtctgcaggctctgtg
ctcgtcgtgcctgataacaactatctgataaagccaattaggttctcaggtccttgtaaa
tccaaccttacgttgcagatatatggaaccattgaagcatccgatgatcgatcagactat
gaggaagatgataggcactggattgtgtttgaacgtgttcagaatttcttagtcgaaggt
ggtggaaccattgatggaaatggcaagatttggtggcaaaactcatgcaaactcaataaa
gatcttccttgcaaggacgcaccaacggctctgaccttctataaatgcaagaatttggta
gtagaaaacctgaaaatccaaaatgcacagcagatgcatgtttctttccaaggtagcaag
aatgttaaaatctccaatcttatagttacttcacctgaagagagccccaatactgatgga
atccatgtcacaagtacccaaaacatccaaattacagactgtgtcataggaacaggtgat
gattgtatctccattgtaagtggatcccaaaatgtgcaagccatgaacattacctgtgga
ccaggtcatggaataagtattggaagcttagggtctggaaactcaaaagctcatgtttca
ggagtgaccattaatggtgctaaactttctggcactacaaatggagttaggatcaaaaca
tggcagggagggtctggaaatgcaagcaacatcaagtttcaaaacattaaaatggacaat
gtcagcaaccccattataatagatcagaactactgtgatcaagataaaccatgcaaagaa
cagaaatcagcagttcaagtgaaagatgtggtgtataagaacataaaggggaccagtgct
tctcatgtggcaatcaagtttgattgcagcaactcacatccatgtgaaggcatattgttg
caagatgttagccttgaaagacaaagaggggatgaaacagcaatagccctatgcaacaat
gttgatgttgctcaagtgggagttgtttctcctcactgtccttag
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