Ricinus communis (castor bean): 8260359
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Entry
8260359 CDS
T01087
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8260359
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
8260359
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
8260359
NCBI-ProteinID:
XP_025014498
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Position
5:complement(13887789..13889685)
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AA seq
405 aa
AA seq
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MSADLSVFSLFLFSLVITPHLVLSSPLPDPELVVQDVHRSINASRRNLAYLSCGTGNPID
DCWRCDPNWETNRKRLADCAIGFGKDAIGGRNGRFYVVTDSGDDDAVNPKPGTLRHAVIQ
DEPLWIIFKRDMVIQLKQELVMNSFKTIDGRGASVHIANGPCITIHYATNIIIHGLNIHD
CKQGGNGDIRDSPDHFGWWTQSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAIT
LSNNFFTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSASPTINSQGNRFLAPDAREKKEVTKHEDAPESEWRHWNWRSEGDQLLNGA
FFRQSGAGASSTYARASSLSARPSSLVNSITRTAGALNCRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggatctttcagtcttttcccttttcctcttctcccttgtgatcactccacat
ctcgttctctcttctcctcttcctgatcctgagctagttgtacaagacgtacacaggagt
attaatgcctccaggaggaacttggcctacctgtcctgtggaaccggtaaccctattgac
gattgctggcggtgtgaccctaactgggagaccaaccgcaagagattagccgattgtgct
attgggtttggtaaagatgctatcggcggaagaaatggtagattctacgtggtgacggat
tccggtgatgatgatgctgtgaacccaaagccggggactttgaggcatgctgtgattcag
gatgagccactgtggattatttttaagagagatatggtaattcagttgaagcaagagtta
gtcatgaattctttcaagaccattgatggcagaggtgctagtgttcacattgctaatgga
ccgtgtattactattcattatgctactaatattatcatccatggattgaacatacacgac
tgtaagcagggagggaatggtgatatcagggactctcctgaccactttgggtggtggact
caatcggacggtgatggagtttccatctttgccagcaagcatatttgggttgaccattgt
tcattgtctaactgccacgatggtcttattgatgctattcatggatctaccgccatcact
ctctctaataacttctttacccatcatgacaaggtcatgctcttgggccacagcgactct
tatactcaagacaaggacatgcaagttaccattgcctttaatcattttggagaagggctg
gtgcaaagaatgccaaggtgcaggcatggatatttccatgtggtgaacaatgactacacg
cattgggagatgtatgccattggagggagtgcttctcctacaatcaacagccaaggaaat
agatttcttgcacctgatgccagggaaaagaaagaagtgaccaaacatgaggatgcaccg
gagagcgaatggagacactggaactggagatctgaaggagaccaattactgaacggtgca
ttcttcaggcaatcaggggcaggagcttcttcaacatatgctagagcttctagcctgagc
gcaagaccctcttctctggtgaattcaatcacccggactgctggtgcgcttaactgcaga
aagggttctcgctgctag
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