KEGG   Ricinus communis (castor bean): 8260415
Entry
8260415           CDS       T01087                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03020  RNA polymerase
rcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8260415
  09124 Replication and repair
   03420 Nucleotide excision repair
    8260415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8260415
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8260415
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     8260415
  RNA polymerase III system
   RNA polymerase III
     8260415
  RNA polymerase I system
   RNA polymerase I
     8260415
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8260415
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DPBB_1 Ribosomal_S4
Other DBs
NCBI-GeneID: 8260415
NCBI-ProteinID: XP_002529165
UniProt: B9ST46
LinkDB
Position
10:21060394..21064249
AA seq 238 aa
MEENGVTAAVNGNGTDASERFNMEGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGY
SVPSSEIDLSLQEFRAIHGPNPDIDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIA
GQIVNKDSLTGLILVLQNQITNQAMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLT
DREKQKLLKDYCIEEKQLPRLLRKDAIARYYGLEKGQVVKVTYSGEITESHVTYRCVW
NT seq 717 nt   +upstreamnt  +downstreamnt
atggaagaaaatggggttacagcagcagtgaatggaaatggtactgatgcaagtgagagg
tttaacatggagggattaggaaagtgcttcagtagctatgcggatgatggtactcatgag
actcacagatactatctttcaagaagaactgttcttgagatgttgagagatagagggtat
tctgttcccagttcagaaattgatctttctcttcaagagtttcgagctattcatggccct
aacccagatattgatcgcctcaaattttctgccactcacacttccgatccttctaaaagg
atgctggttctatttggtgggcctggtatcattaaagttagcacaatccgtgcaattgct
ggtcagattgttaacaaagacagtttaactggtctgattttagtcttgcaaaaccaaata
acaaaccaagctatgaaagctgtggatctttttaaatttaaggttgagatgttccagatt
actgatttgcttgtcaatatcacaaagcatgtattaaaaccaaagcatcaggtcctgact
gatagggaaaagcaaaagctcttaaaagactactgcatcgaagaaaagcagcttccccga
cttttaaggaaagatgcaatcgcacgatattatgggctagagaagggccaagtggtaaag
gttacctactccggtgaaatcaccgagtcacatgttacttaccggtgtgtctggtaa

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