Ricinus communis (castor bean): 8260447
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Entry
8260447 CDS
T01087
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8260447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8260447
03036 Chromosome and associated proteins [BR:
rcu03036
]
8260447
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8260447
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
8260447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
8260447
NCBI-ProteinID:
XP_048234183
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All DBs
Position
8:complement(6733267..6745784)
Genome browser
AA seq
1091 aa
AA seq
DB search
MEDIEMEASPPSYFDPEDLTSREQFRRYGKRHSVSSVSPHQDASVSKFKDGRLLYEGHSI
HSPTNAALLLESIKQEADSIDTDHFESTPPAATKSASKRRPSIDIRGISDGDFGIDSIGR
LGSESLKACKIEDESLTDSGETVFGLFASLLDSAIQGLMPIPDLILRFEKSCRNVAESIR
YGPNVRHRVVEDKLMRQKAQLLLDEAATWSLLWYLYGKVTEEPPEELILSPSTSHLEACQ
FVVNDHTAQLCLRIVQWLEGLASKALDLESKVRGSHVGTYLPNSGIWHHTQRFLRKGASS
TNIVHHLDFDAPTREHAHQLPDDKKQDESLLEDVWILLRAGRLDEACDLCRSAGQPWRAA
TLCPFGGLDLTPSVEALVKNGKNRTLQAIELESVIGHQWRLWKWASYCASEKIAEQNGGK
YEVAVYAAQCSDLKRMLQICTDWESACWAMAKSWLDVQVDLELAHSEPGRMDQLKSYGDV
SEGSPGQIDYAANNSLGPENWPLQVLNQQPRNLSALLQKLHSGEMVNEAVSRGCKEQQRQ
IEMDLMLGNIPDLLDLIWSWISPSDDDQNVFRPHGDPQMIRFGAHLVLVLRYLLAEEMKD
SFREKLMNVGDLILHMYVMFLFSKQHEELVGIYASQLARHRCVDLFVHMMELRLNSSVHV
KYKIFLSVMEYLPFSSEDDSKGSFEEIIERILSRSREIRVGKYDKSSEVAEQHRLQSLQK
AMAIQWLCFTPPSTIENVKDVSFKLLLRALMHSNILFREFALISMWRVPAMPIGAHALLT
LLAEPLKQLSEVPDTLEDYVSENLKEFQDWSEYYSCDATYRSWLKIELENAVPPPELSLE
EKQRSITAAQETLNSSLLLLLRKENPWLASVEDHAYESAAPLFLELHATAMLCHPSGECM
CPDATICTALMSALYSSVSEETVLHRQLMVNVAISSRDNYCIEVVLRCLAVEGDGLGCHQ
ANDGGILATVMAAGFKGELARFQAGVTMEISRLDAWYSSAEGSLEEPATFVIQGLCRKCC
LPEVILRCMQVSVSLMESGNPPENHDDLIELVACPETGFLHLFSQQQLQEFLLFEREYSV
VKMELEEELSS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattgaaatggaggcatctcccccaagctatttcgatcctgaagatctcact
tcaagagaacaatttcgccgttacgggaaaaggcactcagtttcaagtgtatcaccgcat
caagatgcttcggtttccaagttcaaggatggacggcttttgtacgaggggcatagtata
catagtccgacgaatgctgcgcttcttctcgagagcattaaacaagaggctgatagtatt
gacactgatcattttgaaagtacaccacctgctgcgacaaagtctgcttctaaaagaaga
ccgtccattgatattcgcggtatctctgacggtgatttcgggattgattcaataggacga
cttggaagtgagtcgcttaaagcttgtaagatcgaggatgaatcgctaacagatagtgga
gagacagtttttggtttatttgcgtcacttcttgattctgctattcaagggttgatgcct
attcctgatttgattttgagatttgagaaatcatgccggaatgttgcagagtctatcagg
tatgggcccaatgtacgccatcgagttgtagaagacaaattgatgaggcagaaagcacaa
cttcttcttgatgaggctgctacctggtctcttttgtggtacctatatgggaaagtgaca
gaggaaccacctgaagagcttattttgtcaccctcaacatcacatttagaggcttgtcag
tttgtcgtgaatgatcatacagcacagttatgcctccgaattgttcaatggctggaagga
ttagcctctaaagccctcgatttggaaagcaaggttcgtggatctcatgttggtacgtat
cttcccaattctggaatttggcaccatactcaacgctttttgaggaaaggtgcttccagc
acaaatattgttcaccacttggattttgatgctccaacacgtgaacatgcccatcagcta
ccagatgataaaaaacaagacgagtctcttctggaggatgtctggattcttttaagggca
ggaagactggatgaggcatgcgatctttgccgctctgctggacagccatggagagctgca
actttgtgtccttttggagggttggacctaactccttctgttgaagccctcgtgaagaat
gggaagaatagaacccttcaagccattgaattagaaagtgtcattggtcaccaatggcgt
ctatggaaatgggcttcatactgtgcatcagagaaaattgcggagcaaaatggtggaaaa
tatgaagtagctgtatatgcagcacaatgcagtgacttgaagcgcatgcttcaaatctgc
acagactgggagtcagcatgctgggcaatggcaaagtcttggcttgatgttcaagtggat
ttagagctagctcattcagaacctgggcgaatggatcagcttaaaagctatggagatgtt
agtgaagggagtcctggacaaattgattatgccgctaacaattctcttggaccagaaaat
tggccactgcaagttctgaaccagcaaccaagaaacctttctgctcttcttcagaaactt
cactcaggtgaaatggtcaacgaagctgtcagtcgtgggtgcaaggagcagcaacggcaa
attgagatggatcttatgttgggtaacatcccagacctactggatctgatctggtcatgg
atatcaccttcagatgatgatcaaaatgtcttcaggcctcatggtgatcctcaaatgatc
cgctttggtgctcacttagtgcttgtgcttaggtatttacttgcagaggaaatgaaggat
tcttttagagagaagcttatgaatgttggcgatcttattctacacatgtatgtgatgttt
cttttctcaaagcaacatgaggagttagttggaatttatgcatctcagcttgcacgtcat
cgttgtgtggacctttttgtgcacatgatggagctgaggcttaatagcagtgtgcacgtt
aagtacaaaattttcctttctgtaatggaatacttgccattttcttctgaggatgattca
aaaggtagttttgaagaaattattgagaggattctttcaagatctcgggaaatcagagta
ggaaaatatgataagtcatcagaggttgcagagcagcaccgtttgcagagtcttcaaaaa
gcaatggcgatccaatggctctgctttacaccaccttccacaattgaaaatgttaaagat
gttagtttcaaacttcttctgcgagcattgatgcacagcaacatactgttcagagaattt
gctttgatctctatgtggagagtgccagcaatgccaattggtgcacatgcattgcttact
ttacttgctgaaccgttgaagcagctttcggaggttcctgatacacttgaggattatgtt
tctgagaatctcaaagagtttcaggactggagtgagtactactcctgtgatgcaacatac
cgcagctggctcaaaattgaattagagaatgcagttccgccccctgagctatcgctggag
gaaaaacaaagatccattacagcagcccaggaaacattgaattcatctttattgttgcta
ttaaggaaagagaacccttggttggcttcggttgaagatcatgcatatgaatcggcagca
cctctatttcttgagctgcatgctactgctatgctctgccacccttctggtgaatgtatg
tgtccagatgccaccatttgtacagcattaatgagtgccctctactcttcagtgagcgag
gagacagtcttacaccgccaattgatggtgaatgttgccatttcatcaagggacaattac
tgcattgaggttgttcttcgctgtttggcggtagagggtgatggactcgggtgccaccaa
gctaatgatggtggtattcttgctactgtcatggcggctggatttaagggggagcttgct
cgatttcaagcaggagttactatggaaatatccagattagatgcttggtactctagtgca
gagggatctttagaagagccagcaacatttgttatacaaggtctttgtcgtaaatgttgt
cttcctgaagttattcttcgatgtatgcaggtttctgtttcacttatggagtcgggcaat
ccaccagaaaaccatgatgatttgattgaacttgttgcttgcccagaaactgggttcctc
catttgtttagtcagcaacagttgcaggaatttctattgtttgagagagaatattcagta
gtcaagatggagcttgaagaggaactctcgtcttaa
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