Ricinus communis (castor bean): 8260455
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Entry
8260455 CDS
T01087
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8260455
03009 Ribosome biogenesis [BR:
rcu03009
]
8260455
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8260455
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
8260455
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
90S particles
Helicases
8260455
Pre-60S particles
8260455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
8260455
NCBI-ProteinID:
XP_002529205
UniProt:
B9ST86
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All DBs
Position
1:complement(12675449..12681086)
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AA seq
598 aa
AA seq
DB search
MAIVEEKNMTNSVSVDEKKRKRKRNRVKKVTAKEEEEEEEEESHLHNVTSASQIEAAEED
EREIEEESKDKKKKKKKKNSDYNNNEENEVSKNEGQDGDKVRKRGSGIMSTDSFESLGLS
EPTLKAIQEMGFQYLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFLIPAVELLYNVHFA
PRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARKGEAERIVKGVNLLVA
TPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKSRQTALFSATQ
TKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVHSAKRFILLYSFLKRNLSKK
VMVFFSSCNSVKFHSELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAAR
GLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVP
VKEYEFDVKKLANVQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQ
AVAASFCFSCPPKVNLNIDSNASKFRKKAHKGSRNGFSESNPYGRQRDEDNTRQFVRH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagtagaggagaaaaacatgacgaatagcgtatcagtggatgaaaagaaaaga
aagcgaaagcgaaacagagtaaagaaagttacagcaaaggaagaagaagaagaagaagaa
gaagaatcacacctacacaacgttacttctgcttctcaaattgaagcagcagaagaagac
gagagagaaattgaggaagaaagtaaagataagaagaagaaaaagaagaaaaagaatagt
gattataataataatgaggaaaatgaagtttcaaagaatgaaggacaggatggtgataag
gtgaggaagagagggagtgggattatgagtacagattcttttgaatctttaggattgtct
gaacctactcttaaagctattcaagaaatgggatttcagtatttaactcagattcaagcg
agggctattccacctcttctagtaggcaaagatgttcttggtgctgcaaggacaggttct
gggaagactcttgctttcttaataccagctgttgaattgttatataatgtccatttcgct
cctcgcaatggcaccggtgttgttgtcatttgccccactagggaacttgccattcagact
catgctgtggcaaaggaccttctcaaatatcactcacagactcttggcttggtcattggg
ggttctgctagaaaaggagaagcagaacgcattgttaaaggagtcaatttattggttgca
actcctggtcgacttcttgatcatcttcaaaataccaagggatttatatataagaacttg
aagtgcctcatgattgatgaagcggataggatactggaggcaaactttgaagaagaaatg
aaacaaattatcaagattctgccaaagagtaggcaaactgctttattttcagcaactcaa
actaagaaggtggaggatcttgcccgtctgtcttttcaaactactcctgtctatattgat
gtggatgatggaagaactaaggtcacaaatgagggtctgcagcaaggctattgtgtagtt
catagtgccaagagatttattcttctctactcctttttgaagaggaatttatcaaagaaa
gtgatggtcttcttctcctcatgtaattcggtcaagttccattctgaacttcttagatac
attcaggtggaatgttttgatatccatggaaaacagaagcagcagaaacggactactacc
ttttttgatttttgcaaagcagagaagggaatattgctatgcactgatgttgctgctcgt
ggtcttgatattcctgctgtggactggatagtgcagtacgatcctcctgatgaaccgaag
gaatacattcatcgggttggccgtacagcccgtggagaaggtggaaaaggcaatgccctg
cttttcttgattccagaagaactgcaatttctgcgatatctaaaggctgcaaaagtccct
gttaaagagtatgaatttgatgttaagaagttggcaaatgttcagtctcatctggagaag
ttggtggctaacaactattatctgaacaagtctgctaaagatgcttatagatcttatata
ttggcctataattcacattctatgaaagacatatttaatgtccaccgcctcgatctgcag
gcggttgctgcttcattttgcttttcttgtccaccgaaggtgaatctgaacatagacagc
aatgcttccaaatttagaaagaaggctcataaaggaagtcgcaatggtttcagtgagagc
aacccttatggaaggcagagggacgaagataatacacgacaatttgtaaggcattag
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