Ricinus communis (castor bean): 8260461
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Entry
8260461 CDS
T01087
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8260461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8260461
Membrane trafficking [BR:
rcu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
8260461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_17
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_19
TPR_7
TPR_9
CFAP70_TPR_C
TPR_12
RMD1-3
PPTA
TPR_20
CFAP70_mid_TPR
CABIN1_N
ARM_TT21_5th
FliN_N
NGF
TPR_Slam
PRP6_TPR
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
8260461
NCBI-ProteinID:
XP_048227991
UniProt:
A0ACM4CQ29
LinkDB
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Position
1:complement(12629576..12640466)
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AA seq
750 aa
AA seq
DB search
MSMRELVSGGAACAVPGSSSSSNPLGALANNLLGSSSKTQERLKEIPTSTATSSENHFYQ
DVQDPLRALPGAEFEQKSFPHPGAQGSEFFRGFRSADQHGLADAWDEIQRSHGPPPPQAN
IPQLDNIYNRGPQLQPTLDGPPQRILSSFLHSFVESSRGGIPFRPTQLPMLGLSEGDKQC
IRDRSSIMARHFFADKSEDFINAQVNALLSSLEIDGDVRAKGPMPGRFRELEDYWNESQG
SLRPGPHAADGWITEFSQQRLDHGNPDAWAHAFERQHGANGWAFEFDQEQQLLSVDQMRG
ANISNLAAMEQTRMLAHTLAQNNDPKFQNSKFLQFVSKMSRGELIIDDNQVKPATLSAPG
DWATEYQQQYTGGTSWADEYVQDQVPHGPEQWGNEFAAERGQNGSVDDQWVNEFSKLHVN
DWVEEFGQQVEEGALGDSSVDNWANAYDEYMNEQVAAKQQSDASRGVYVFSDMNPYVGHP
NPLKQGQDLFHKGLLSEAVLALEAEVLKNPDNAEGWRLLGIANAENDDDQQAIAAMMRAQ
EADPANLEVLLALGVSHTNELEQAAALKYLYGWLRNHPKYGSLASPELADSLYYADVARL
FNDASQMSPEDADVHIVLGVLYNLSREYDKAIASFQTALKLKPQDYSLWNKLGATQANSV
QSADAIYAYQQALDLKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYL
RISLSCASRNDMLEACDSRNIDLLQKEFPL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcgagagctagtttcaggaggagcagcatgtgcggttcctggttcttcttct
tcttccaatcctcttggtgctcttgccaataatctccttggctcatcttctaaaacccag
gaaaggctaaaggaaattccaacatcaacagctactagttccgagaatcatttttaccag
gatgttcaggatcccttgagagcacttccaggtgctgagttcgaacaaaaatcatttcct
caccctggcgctcagggttcggaattttttcgtgggtttcgctctgctgatcagcatgga
cttgctgatgcttgggacgagatacagcggtctcatggtcctcctccacctcaggctaat
attcctcaattggataatatatataatcgtggacctcagcttcaaccaactttggatgga
ccaccccaaagaatattgtcaagcttcttgcactcatttgttgaaagtagccgtggtgga
attccttttcgtcctactcaactgccaatgttaggattatctgaaggtgataaacaatgt
atacgtgatcgtagcagcataatggcccggcatttttttgctgataagagtgaagatttt
attaacgcacaggtgaatgcactattatcttcattagaaattgatggtgatgttcgggcc
aaggggcctatgcctgggagatttagggagctggaggattattggaatgagtctcaaggt
agtttgagacctggtccccatgctgcggatggatggattacagaatttagccagcagaga
ttagaccatggtaatcctgatgcttgggctcatgcatttgaacgacagcatggtgctaat
ggttgggccttcgaatttgaccaggaacaacagttgttatcagtggatcaaatgagaggt
gcgaatatctcaaacttggctgcaatggagcagactcgtatgctcgcgcacactctagct
caaaataatgacccaaaatttcagaattcaaagtttcttcaatttgtttcaaagatgagt
cgtggtgaacttattattgatgataatcaagtcaagccagctacattgtctgcacctggt
gactgggcaactgaatatcaacaacagtacactgggggtacttcatgggctgatgaatat
gtgcaagatcaggttccgcatggccctgagcaatggggaaatgagtttgctgctgaaaga
gggcaaaatggctctgttgatgatcagtgggtaaatgaattctcaaagttgcatgttaat
gactgggtagaagaatttgggcaacaggttgaggaaggagcattaggggacagttcagtg
gataactgggcaaatgcatatgacgagtacatgaatgaacaagtagctgctaagcagcag
tcagatgcttcaaggggagtctatgtgttttctgatatgaatccttatgttggtcacccc
aatcctttaaaacaaggccaggatctattccataaagggcttctaagtgaagcagtgctt
gctttagaggctgaagtcttgaaaaatcccgataatgctgaaggttggaggttacttgga
atagcaaatgcagagaatgacgatgatcaacaggctattgcagcaatgatgcgtgcgcag
gaggctgatcctgcaaatcttgaagtgcttcttgctcttggtgtgagtcatacaaatgaa
ttggagcaggcagctgccttgaaatacttatatggatggcttcgtaatcacccgaaatat
ggatcacttgcctctccagagcttgctgattcgttgtattatgctgatgttgctagatta
ttcaatgatgcttctcagatgtcacctgaggatgctgacgtgcacatcgtacttggcgtg
ctatataatttatccagggaatatgacaaagccattgcttcctttcaaacagctttgaaa
cttaagccacaggattactccctctggaacaagcttggtgcaacccaggcaaacagtgtt
cagagtgctgatgcaatatatgcctaccagcaggcacttgatttgaagcctaattatgtt
cgtgcatgggcaaacatgggaatcagttatgccaatcagggtatgtacgaggactccatc
cgctattatgtccgggcacttgctatgaaccctaaggcagataatgcctggcaatatttg
aggatttcactaagctgtgcttctaggaatgacatgctagaggcttgtgattcacgcaat
attgatcttctgcagaaagagtttccactgtaa
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