Ricinus communis (castor bean): 8260670
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Entry
8260670 CDS
T01087
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8260670
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rcu00535
]
8260670
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
8260670
Meiosis-specific proteins
Cohesin complex and associated proteins
8260670
Proteoglycans [BR:
rcu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
8260670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
8260670
NCBI-ProteinID:
XP_048229798
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Position
5:1863650..1880414
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AA seq
1204 aa
AA seq
DB search
MYIKQVIIEGFKSYREQIATENFSPKINCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLRELDEEKEELRKYQQLDRQRKSLEFTIYDKELHDARQKLG
EVEEARNRVSETSAKMYNDVLDAHERSKDLEKMLKDLTKEVQGLNKEKEVVEKRQTEAIK
KQTELELDVKDMQERISGNAQAKEDAMKQLDFLQREIQDSMEELDKITPLYENQAIKEKE
IAKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLQRVLSSNLAQEQKLQDEI
HKLNVDLEERDAYIENRKAEIAVSESVIFQSREGFNSHRAQRDKLQDERKSLWAKESALI
AEIDKLRTEVEKAEKSLDHATPGDVRRGLNSIRRICRDYKINGVFGPIIELIDCDEKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSSKGGRVTFIPLNRVKAPHVHYPQSSDVIPL
LKKLKFSSNFTPAFAQVFARTVICRDLDVATRVARADGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNIIMQNTRSINMKEEELEKVRSMLQDIDQKITEQVTEQQKIDAKRAHDKS
ELEQLKQDIANATKQKQFISKALVSKGKSLADVQTQVDQLRGSMAMKQAEMGTELIDHLT
PEEKDLLSRLNPEIADLKEKLIACRTDRIETETRKAELETNLTTNLKRRKQELEAVISSA
ETDILHGEAELKGQELTDARSLVEVTTQELKRVSDSISELTKQLKKIKDEKTKLKGMEDN
YERTLQEEAKELEQLLSKRNVLQAKQEEYSNKIRELGPLSSDAFETYKRKSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHGDDDYDDDGPREADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKDDALDFIEHDQS
HNAD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcaggttataattgaaggttttaagagttacagagaacagattgctact
gagaatttcagtccaaaaattaactgtgttgttggggctaatggatcaggcaagacaaac
tttttccacgccattcgttttgtacttagtgatctttttcaaaacctacggagtgaagat
aggcatgcactacttcatgaaggtgcagggcaccaagttttatctgcttttgtggagatt
gtgtttgataattctgacaatcgaattccagttgataaggaagaagtgcgtctgcgtaga
acaattggcctgaaaaaggatgagtattttttggatgggaagcacatcacgaaaacagaa
gttatgaatttactagaaagtgctgggttctcccgctcaaatccatactatgtggtgcag
caagggaagatagcatcattgacattgatgaaagactcggagcgtctggatttactaaag
gaaattggtggtactcgagtatatgaagaaagacgtcgtgaaagtttaaaaattatgcaa
gaaacagggaacaaacgaaaacagattattcaagttgttcaatatttggatgagagactg
agggaactggatgaagagaaggaggagctaagaaaatatcagcagcttgacagacagcgt
aaatctctagaatttaccatttatgataaggaacttcatgatgcccggcaaaagttgggg
gaggtagaagaggctcgaaatagggtttctgaaacatcagccaagatgtataatgatgtg
ctggatgcacatgaaaggtccaaggacttggaaaagatgcttaaggatcttactaaagag
gttcaaggattgaacaaagagaaagaggtagtagagaaacgacaaactgaagcaataaag
aagcagacggagcttgagcttgatgtgaaagacatgcaggagaggatttctggaaatgct
caagccaaagaggatgcaatgaagcaacttgattttctccagagagaaatacaagattcg
atggaggagcttgacaaaattactccattgtatgagaaccaagcaattaaggaaaaggag
attgctaaaggaataatggagcgtgaaaagcagcttagcattctgtatcaaaaacaaggt
cgtgccacccagttttccagcaaagctgctcgtgacaaatggctccaaaaggaaattgat
gatctccaacgcgttctttcttcaaatttagctcaggagcaaaagcttcaggatgaaatt
cacaaacttaatgtggacttggaagagcgagatgcctacattgagaatcgcaaagctgaa
attgcagtatcagaatctgttatttttcagtcccgtgaaggatttaatagtcatagagcg
cagagagacaagctgcaggatgagcggaagtcattgtgggcaaaagaaagtgcacttatt
gctgaaattgataagctaagaacagaagttgaaaaagcagagaagagccttgatcatgct
actcctggtgatgtgaggagaggactcaactccattcgtcgaatctgtagagactataaa
atcaatggagtttttggtccgattattgagttgattgattgtgatgagaaattttttact
gcagttgaagtcactgctggaaacagtttgtttcatgtggtggtggagaatgatgaaata
tcaacccagataattagacaccttaattcatcgaaaggtggacgtgttacttttatacca
ctgaacagggttaaggcaccacatgtacattatccgcagagttctgatgtgatacctttg
ctgaagaaattgaagttctcttccaattttacccctgcttttgcccaggtatttgctaga
actgtaatatgccgagatttggatgtagccactagagttgcacgagctgatggtctggac
tgcataactttggaaggtgatcaagtaagcaagaaaggtggtatgacaggaggattttat
gaccatcgtcgttcaaaattgaagtttatgaatataattatgcagaatacaagatctatc
aacatgaaggaagaagaactggaaaaagttagatctatgctacaagatatagaccagaag
attactgaacaagtgactgagcagcagaaaattgatgccaagcgggcccatgacaaatca
gagttggaacagctgaagcaggatattgctaatgctactaaacagaaacaatttatttca
aaagctcttgttagtaagggaaaatcacttgcagatgtccaaactcaagtagatcagctc
agaggcagtatggccatgaagcaggccgagatgggcacagagctcattgatcacttaaca
ccagaggaaaaagatcttctatcgcgtctgaatcctgaaatagcagatctgaaagagaaa
cttattgcctgcagaactgatcgcattgagactgaaacaagaaaagcagagctagagact
aaccttacgacaaatctgaaaaggcgaaagcaagagttggaagctgtcatatcatctgca
gagactgatatcttgcatggtgaagctgagttgaaggggcaggaattgacagatgctagg
tcattggttgaagttacaactcaggagctgaaaagagtttctgacagtatatctgaacta
acaaagcaactcaagaagatcaaagatgaaaagacaaaattaaagggtatggaagacaac
tatgagaggacactacaggaggaagccaaagaattagagcagttattgagtaaaagaaat
gttcttcaagccaaacaagaggagtactcgaacaaaattagggaattgggccccttatca
tcagatgcttttgagacgtataagcgcaagagcatcaaagagttgcacaaaatgctccac
aggtgcaatgagcaactgcaacaattcagccatgtcaacaagaaggcattagatcagtat
gtaaacttcacagagcaacgagaagaactccagaaaaggcaagctgagcttgatgcaggt
gatgagaaaatcagagaactaatatctgttttggatcagcggaaggatgaatctatagag
cgtacttttaaaggtgttgctcggcattttcgagaagttttctctgaacttgtccaaggt
ggtcatggtcatctagttatgatgaagaaaaaggatggtgatcatggtgatgatgactat
gacgatgatggccctcgggaagcagatttggagggcagggttgagaagtacattggcgta
aaagtaaaggtttcattcacagggcaaggggagacacaatcaatgaagcaactgtcggga
ggacaaaaaactgttgttgccctgacattgatctttgccatacaacgatgcgatcctgct
cccttttatctttttgatgagatagatgcggctctagaccctcagtacagaactgctgtc
ggaaatatgattcgtcgcttggctgatatggcaaatacacaatttataacaacaacattc
cggccagaacttgtcaaagttgctgataagatatatggggtcacgcataaaaatagggtg
agccgtgtcaatgttgtttccaaggacgatgcattagattttatcgagcacgatcaatct
cataatgcagattaa
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integrated database retrieval system
