Ricinus communis (castor bean): 8260798
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Entry
8260798 CDS
T01087
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03030
DNA replication
rcu03410
Base excision repair
rcu03420
Nucleotide excision repair
rcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8260798
03410 Base excision repair
8260798
03420 Nucleotide excision repair
8260798
03440 Homologous recombination
8260798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8260798
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8260798
Enzymes [BR:
rcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
8260798
DNA replication proteins [BR:
rcu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
8260798
DNA repair and recombination proteins [BR:
rcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
8260798
NER (nucleotide excision repair)
GGR (global genome repair) factors
8260798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
8260798
NCBI-ProteinID:
XP_002522989
LinkDB
All DBs
Position
9:8153992..8164726
Genome browser
AA seq
1097 aa
AA seq
DB search
MGLSTATTQFSSFRPICPSSSSSSFKFFHPCPCFSSSRNSLPRFWVEPSGVIVNLQGRGE
KRVLTSRYYSTASSLEVGTKLRPSTKSSWIEETEDLREYRRFQKSKILHDCNTGNARGNN
EISGDKSYSVMHGTMVANKKDVSVHDKSSNEKQELSRNSGGHLAMGNSRIKNEIEDDDNY
PVIMVANQKLVPKQVVENKRPGSLSLNNISRDSAQVASVDKTNNQAIDRKRLNGFSLSKS
LELDAQTDTSLSAKILGNWKEKTFNEIEDIGVDQIEHHLTDGKLAAVGDAEKFSNTKEAS
RHPDVKRRLTSIFGKILVVNDISMADGVVKKLTNEYRHLIHACDTEVAKIDVKQETPVDH
GEIICFSIYSGPEADFGNGTSCIWVDVLDGGGRDLLVKFKPFFENPEIKKVWHNYSFDKH
VIQNYEVPVCGFHADTMHMARLWNSSRRTEGGYSLEALTGDKRVMSGAQSCFEGLIGKVS
MKTIFGKNKLKKDGSEGKMITVAPVEELQREEREPWICYSALDAISTWQLYESLKRKLFH
MPWNLNGKPVGKSMLDFYKEYWRPFGELLVRMETEGILVDRAYLAEIEKVAKVEQEIAVN
RFRNWACKYCPDAKYMNVGSDTQLRQLFFGGIANSKDPDSILPVEKKIKVPNVDKVIEEG
KKAPTKFCSITLHKIGNFPAEMYTATGWPSVSGDALKTLAGKVSAEYDFVDDIVEDGCEL
ETTEGSETQVPSVLKDVDTSAYGTALKAFPSLEEGIEACHAIASLCEVCSIDSLISNFIL
PLQGSNVSGKRGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLI
VADYGQLELRILAHLANCKSMLEAFKAGGDFHSRTAMNMYPHIHEAVDKGEVLLEWDPQP
GEEKPPVPLLKDAFGSERRKAKMLNFSIAYGKTPVGLARDWKVSIEEAKETVNLWYRERQ
EVLKWQEARKKEAREDGRVHTLLGRARVFPSISHASNAQKRHIERAAINTPVQGSAADVA
MCAMLQISHNKRLKELGWKLLLQIHDEVILEGPTESAEVAKDIVIECMSKPFFNGVNILK
VDLSVDAKCAENWYSAK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggggctttccacggccaccactcagttttcctcttttagaccgatttgcccttcttct
tcttcctcttcgtttaagtttttccatccttgtccttgcttttcttcttctcgcaattca
cttcccaggttttgggtagagccttcaggggtaatagttaacctgcaaggaagaggtgaa
aagagggtattgacttctagatattactctaccgcctccagtctggaggttgggacaaaa
ctccgtcccagcactaaaagttcatggatagaagagactgaagatttgcgagaatataga
aggtttcaaaagagtaaaattctacatgattgtaacacaggaaatgctcgaggaaataat
gagatttcaggagataaaagttattcagttatgcatggaaccatggttgctaacaaaaaa
gatgtctctgtgcatgataaatcaagtaacgagaaacaagaactctcaagaaatagtgga
ggtcatttggcaatgggaaattctcgaattaagaatgagattgaggatgatgataattat
ccagttataatggttgctaatcaaaaacttgtacctaagcaagtagttgaaaataaaagg
ccaggcagcctatccttgaacaacatctcaagagacagtgcacaggttgcatctgtggat
aaaacaaataatcaggcaattgatagaaaaaggctgaatggtttctctttgtccaaaagc
ttggaactggacgcacagactgacacctcattgtcagcaaagatattgggaaattggaaa
gagaaaactttcaatgaaattgaagatatcggtgtcgatcaaattgaacatcacctgact
gatggaaaacttgctgcagttggtgatgctgaaaaattctccaacaccaaggaggcatct
cgccatccagatgttaaaaggagacttactagtatttttggaaagattctagttgttaat
gatatttctatggcagatggagtagtaaagaagcttacaaatgaatatcggcatcttatc
catgcgtgcgatactgaggtggcgaagattgatgtgaagcaagaaacaccagttgaccat
ggagagataatatgcttcagtatttattctggacctgaggcggattttggaaatgggaca
tcatgcatctgggtagatgttttggatggtggcggcagggatcttttggttaagtttaaa
ccatttttcgagaatccagaaatcaaaaaggtttggcataactacagttttgacaaacat
gtcattcagaattatgaagttcctgtttgtgggtttcatgctgacaccatgcacatggca
cgcttatggaattcatcaaggcgtacagaaggtggatactctcttgaagctcttactggt
gataaaagagtcatgagtggggctcagtcgtgctttgaagggttaattggtaaagtgtca
atgaaaactatctttggcaagaacaaattgaaaaaagatggatctgaaggaaaaatgata
actgttgctcctgttgaagagctacaaagagaagagcgagaaccatggatttgttattct
gccttagatgcaataagcacatggcagctctatgagagcttgaaacgcaaactatttcat
atgccatggaaccttaatggaaaaccagttggaaaatctatgcttgatttttacaaggaa
tactggagaccatttggtgagcttctagttagaatggaaactgaggggatacttgttgat
cgagcatatcttgccgagatagagaaggttgccaaagttgaacaggagattgctgttaat
agatttcgcaattgggcatgcaaatattgccctgatgccaagtatatgaatgtaggaagt
gatacacaactacgccagttattttttggtggtattgcaaacagcaaggaccctgacagt
attcttccagttgaaaaaaaaatcaaagttcccaatgttgataaagtgattgaagaaggc
aagaaggctcccacaaaattttgcagtattactctgcacaaaattggtaattttcctgcc
gagatgtatacagcaactggttggccttcggtcagtggtgatgctttgaagaccttggca
gggaaggtctctgcagagtatgattttgtggatgacattgttgaggatggttgcgagtta
gagacaactgaaggttcagaaacacaagtgccatctgtcctcaaagatgtggatacatct
gcttatggaacagctttgaaagctttcccatcactagaagaaggaattgaggcttgccat
gctattgcttctttatgtgaagtttgctctattgattctttgatatctaacttcatcctc
cccttacaggggagtaatgtatcaggaaagaggggccgtgttcattgttcccttaatatc
aatactgaaaccgggcgtttatcagctaggaggccaaatttgcagaatcagcctgctttg
gagaaggacaggtataagattcgtcaggcatttattgctgcacctggaaattcccttatc
gttgctgattatgggcagctggaacttaggattcttgcacatcttgctaactgtaagagc
atgttggaagcattcaaagctggtggagattttcattcaagaacagctatgaacatgtat
ccacatattcatgaagcagttgataaaggagaagtgcttcttgaatgggatcctcaacct
ggtgaggagaaacccccagttcctctactaaaggatgcttttggttctgaaagaagaaaa
gctaaaatgcttaacttttctatcgcttatggaaaaacaccagtcggtcttgcccgggat
tggaaggtgtctatagaggaggctaaggaaactgtcaatctctggtatagagaacgacaa
gaagtgctgaaatggcaggaagcccgcaagaaagaagctagagaagatggacgcgttcac
acattactggggcgggctcgagtcttcccttcaatttctcatgcaagtaatgcacaaaaa
aggcatatcgagcgggctgctataaatacacctgtgcagggtagtgctgctgatgttgcc
atgtgtgccatgttgcaaatatcacataataaacgtctaaaggagcttggatggaagctg
cttttacagattcatgatgaagtaatcctggaaggaccaacagagtcggctgaggttgcc
aaggacatagttatcgagtgcatgtctaagccgttcttcaatggagtgaacattctcaaa
gttgacctatcagtcgatgcaaaatgtgctgaaaactggtactctgcgaagtag
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