Ricinus communis (castor bean): 8260951
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Entry
8260951 CDS
T01087
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
8260951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8260951
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8260951
Membrane trafficking [BR:
rcu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
8260951
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
8260951
Exosomal proteins of other body fluids (saliva and urine)
8260951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Synaptobrevin
T2SSF
DUF1942
Prominin
LarA_C
Motif
Other DBs
NCBI-GeneID:
8260951
NCBI-ProteinID:
XP_002525472
UniProt:
B9SHK3
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All DBs
Position
10:10244527..10246510
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AA seq
313 aa
AA seq
DB search
MNDLMTKSFTSYVDLKKEAMRDLEAGPDPDLEMANASNTMDRNLGLFLEEAENVKKEMES
IRDVLVRLQESNEESKSLHKPEALKLLRNKINADIVTVQKKARAIKTQLEEMDRANAANR
RLSGFKEGTPIYRTRVAVTNGLRKKLKELMMDFQGLRQKMMTEYKETVGRRYFTVTGEYP
DEEIIDKIISDGNGGEEFLKCAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVFL
DMAVMVEAQGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRGSRKWTCIGIILLLIIIL
VIVIPIATSFSHS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctaatgacaaaatccttcaccagctatgtggacctaaagaaagaggccatg
agagatttggaagctggtcctgaccctgatttagagatggcaaatgcatcgaacaccatg
gatcgtaaccttggtctttttcttgaagaagctgagaatgtcaagaaagaaatggaatca
attcgtgatgtactagtccgtcttcaagaatctaatgaagaaagtaaatcactgcacaaa
cctgaggcattaaaattgctgcgaaacaagatcaatgcagatattgttactgtccaaaag
aaggcaagagctatcaagactcagcttgaagaaatggaccgtgccaatgcagctaacagg
cgcctttcagggttcaaagaaggaacaccaatttatagaaccagagttgcagttactaat
ggtttacgcaagaagctgaaggaacttatgatggattttcaggggttaaggcagaaaatg
atgacagaatacaaagaaactgttggtaggaggtatttcacagttaccggagagtaccca
gatgaggaaatcattgacaagattatatctgatggcaatggaggtgaggagtttttgaaa
tgtgcaattcaggagcatgggaaagggaaggtgttagagacagtagtggagatacaggat
aggcatgacgcggcaaaagagattgagaagagcttgttggagctgcatcaagtgtttctg
gacatggctgtgatggtagaggctcaaggagagcagttggatgatattgagcatcatgtt
ctgaatgctagtcattatgttaaggatggtgccaaagagctcaagaccgctaaagattat
cagaggggtagcaggaagtggacgtgcattgggattatacttttgttgattattattctg
gtgattgttatacctattgccactagctttagtcattcttga
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