Ricinus communis (castor bean): 8260973
Help
Entry
8260973 CDS
T01087
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8260973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8260973
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8260973
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8260973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_6
FAIM1
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
8260973
NCBI-ProteinID:
XP_002534375
UniProt:
B9T806
LinkDB
All DBs
Position
10:complement(18689708..18693176)
Genome browser
AA seq
304 aa
AA seq
DB search
MAPGGSACKEVLESHPAISDYEIGTAKTENSSTVTKGLGGKQGLYSNNGVHELLECPVCT
NLMYPPIHQCPNGHTLCSNCKSRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQDLG
CHDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPTLVAHLKDDHKVDMHDGCTFNH
RYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQIGMAPVYMAFLRFMGDDNEAKKFSY
SLEVGGNGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRITGRI
WKEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgggggtagtgcttgcaaagaggttcttgaatctcatccagcaatttcagat
tatgaaattggaacagcaaaaacagagaatagtagtacagtaacaaaaggtttaggtgga
aagcaaggactttattcgaacaacggtgtgcatgagctccttgagtgccctgtctgcaca
aatttaatgtatcctccaattcaccagtgcccaaatggacatacattatgctcaaactgc
aagagtagagtgcataattgttgccctacttgtcgctatgatctcggaaatataaggtgt
ttagctttggagaaagttgcagaatcactagaactgccctgtaagtaccaggacttggga
tgtcatgatattttcccatattacagcaaactcaagcatgagcaacactgtcggttccgt
ccatacagttgcccttatgctggctctgagtgctccatcacaggtgacatcccaacacta
gttgcccatctcaaggatgaccacaaggttgacatgcatgatgggtgtaccttcaatcat
cgctatgtcaaatcaaatccacatgaagttgaaaatgccacatggatgctaactgttttc
aactgttttggaagacagttctgcttgcattttgaggctttccagataggtatggcacca
gtgtatatggccttcttacgttttatgggtgatgataatgaagcaaagaaatttagctac
agcttagaagttggtgggaatggccgcaagctaatatggcagggaattcccaggagcatt
cgtgacagtcacaggaaagttcgtgatagccaggatgggctgattattcagaggagtttg
gctctttatttttctggcggggataggcaagagcttaaattgaggattacaggccgtata
tggaaagaagaatga
DBGET
integrated database retrieval system
