Ricinus communis (castor bean): 8261019
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Entry
8261019 CDS
T01087
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03082
ATP-dependent chromatin remodeling
rcu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8261019
03083 Polycomb repressive complex
8261019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8261019
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
8261019
Histone modification proteins
HAT complexes
HATB complex
8261019
HDAC complexes
Sin3A-HDAC complex
8261019
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
8261019
PRC2.2
8261019
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
8261019
Heterochromatin formation proteins
Other heterochromatin formation proteins
8261019
Chromatin remodeling factors
NuRD complex
8261019
NuRF complex
8261019
NuRF complex (fruit fly)
8261019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
MIOS_WD40
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
8261019
NCBI-ProteinID:
XP_002534420
UniProt:
B9T851
LinkDB
All DBs
Position
8:4142443..4146924
Genome browser
AA seq
415 aa
AA seq
DB search
MAAATEEEQEQELTPEQLDEEFSVWKKNTPFLYDLVISHPLEWPSLTVHWLPLAAPLPHP
TNPSSFSVHKLVLGTHTSDDFPNFLMIADAVLPIRGAQPKFDAKSEDSLIPKVEISQKIR
VDGEVNRARCMPQNPAFIAAKTSGCDVYVFDSTKQSERQQDDGCDPDLTLRGHDKEGYGL
SWSPFKPGYLVSGSHDNKICLWDVSAVAKDKVLDSMHVYEAHDSVVEDVSWHLKNENIFG
SVGDDCMLMIWDLRTNQTQHSIKAHEKEVNYLSFNPYNEWILATASSDATVGLFDMRKLS
APLHVLSGHTEEVFQVEWDPNHETVLASTADDRRLNVWDLNRIGEEQLELDAEDGPPELL
FSHGGHKAKISDFSWNKNDPWVISSVADDNTLQVWQMDEGIYRDDDDMLAADDDA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctacagaagaagagcaagaacaagagctcactccagaacaattagatgaa
gagttctcggtatggaaaaagaacacaccattcctttacgacctcgtcatttctcaccca
cttgaatggccatctcttactgtccactggctcccactcgccgctccactacctcacccc
actaatccttcttctttctccgtgcacaagctcgttcttggaactcatacatctgatgat
tttcccaactttctcatgattgctgatgctgttctcccaattcgcggtgctcagcccaag
tttgatgccaaatctgaagattctctcattcctaaggtagaaatatctcagaagatacgt
gttgatggagaggtcaacagggcaagatgcatgccacaaaatccagcttttattgctgca
aagacaagtggctgtgatgtttatgtgtttgattctactaaacagtcagagaggcaacaa
gatgatggctgtgatcctgatttaactttgagaggtcatgataaagaaggatatggattg
tcttggagtccttttaagccgggttatcttgtgagtggttcacatgataataaaatatgt
ttgtgggatgtgtctgctgtggccaaagataaagttcttgactcgatgcatgtttatgag
gcacatgatagtgtcgttgaagatgtgtcatggcacttgaagaatgagaatatatttggt
tccgtcggagatgattgtatgttaatgatctgggacttgcgcacaaatcaaactcagcat
tctattaaagctcatgaaaaagaggtcaattatctttctttcaatccctacaatgagtgg
attcttgctacagcatcttcagatgctactgttggtctgttcgatatgcggaagcttagt
gcacccctgcatgttttaagtggtcacacagaagaggtcttccaagtggagtgggatcct
aatcatgaaacagtgctagcatctacagctgatgacagaaggttgaacgtttgggacctg
aacaggattggggaagagcaattagagttagatgctgaagatggccctccagaacttctt
ttctcgcatggaggtcacaaggcaaagatctcagatttctcgtggaacaaaaatgatccc
tgggtcatttcaagtgtggctgatgacaacactcttcaggtgtggcaaatggatgaaggt
atttatcgcgatgatgatgatatgcttgctgcggatgacgacgcctag
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