Ricinus communis (castor bean): 8261180
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Entry
8261180 CDS
T01087
Name
(RefSeq) ubiquitin receptor RAD23d isoform X2
KO
K10839
UV excision repair protein RAD23
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03420
Nucleotide excision repair
rcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8261180
09124 Replication and repair
03420 Nucleotide excision repair
8261180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rcu03051
]
8261180
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8261180
Proteasome [BR:
rcu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
8261180
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
8261180
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
NQRA_N
Rad60-SLD_2
TECR_N
Dsc3_N
UBA_3
AAA_35
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
8261180
NCBI-ProteinID:
XP_002516727
UniProt:
B9RSK8
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Position
5:complement(17136083..17142513)
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AA seq
381 aa
AA seq
DB search
MKVFVKTLKGTNFEIDVKPEDTVEDVKNNIEIAQGADVYPASQQMLIHQGKVLKDGTTLE
ENKVAENSFIVIMLSKRKVSPSGGSTASSAPPSQAQPASTLPPSATQPSTTAQAPAVTAE
LPQSAAESTPVVNPVSSETDIYGQAASNLVAGSNLEATVQQILDMGGGSWDRETVARALR
AAFNNPERAVEYLYSGIPEQPEVQPLPRAPSSGQAAIPSATAQEPAAPTSGGPNANPLDL
FPQGLPTIGSTTSAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQE
HQADFLRLINEPVEGDGNLLGQLASAVPQSVSVTPEEREAIERLEAMGFDRAIVLEVFFA
CNKNEELAANYLLDHMHDFEE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtgaaaactttgaaaggaactaactttgagatcgacgttaaacctgaa
gacacggtggaggatgtcaaaaataatatagagatagcacagggtgcagatgtttaccct
gcttcacaacagatgctaattcatcaagggaaagttcttaaggatggtacaacacttgag
gaaaataaagttgctgaaaatagttttattgtcattatgttaagcaagagaaaggtttca
ccaagtggaggatcaactgcctcatccgcacctccaagccaagcccaacctgcaagcact
ttgcctcctagtgcaacacaaccatcaacaaccgctcaagctcctgctgtaactgcagaa
ctaccacaatctgctgctgaatctacacctgtagttaatcctgtttcttcagaaacagat
atttatggacaagcagcatcaaatcttgttgcaggaagtaatttagaggctactgttcaa
cagatacttgacatgggaggaggaagttgggaccgtgaaactgttgcgcgtgctctacgt
gctgcatttaataaccctgaaagggctgttgaatatctttactctggcattcctgagcaa
cctgaagtccaaccacttcctcgagctccaagtagtggacaggctgcaattccatctgcc
acggctcaagaaccagcagcacctaccagtggtgggccaaatgcaaaccctttagatctg
tttccacagggcctccccactatcggttccaccactagtgcaggcaccttggattttttg
cgcaatagtcaacagttccaagctctgcgagccatggttcaagcaaacccccaaatccta
cagcctatgcttcaggaactcgggaagcaaaatccacatcttatgcggctcattcaagag
catcaggctgatttcttacgcttgataaatgaacctgttgaaggagacgggaacctactt
ggccagttggcctcagcagttccacagtctgtttctgtcacccctgaggagcgtgaggca
attgagcgtcttgaagcaatgggctttgatcgagccatagtattggaggtattctttgca
tgcaacaagaacgaagaactggcggctaactatctactagatcatatgcatgattttgag
gaatga
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