Ricinus communis (castor bean): 8261445
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Entry
8261445 CDS
T01087
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8261445
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8261445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
8261445
NCBI-ProteinID:
XP_048230462
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All DBs
Position
5:complement(16571240..16576953)
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AA seq
742 aa
AA seq
DB search
MPSALFLQFFSYNPIASSLNPATNKSSLNNAQNPKFATNKNTEFTLLSVPNSQSNAPIKV
PTAPWMKGPLLLQLHELINLSKPRNKNSSNNANIEKSDKVLTGKESGVRGKKAMEKIVKS
IEQLQENQALEKTQCDSQAYEKTQLDSEAFEIGEKLGLIREHGDFGVNKKLKPWEREEKF
VYWRIKKEKAVTKAELILEKELLERLRTEASKMRKWVKVMKAGVTQSVVDQIRYAWRNNE
LAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNYHLTKSSHVSTMDEKI
GSKDGEEEYIPTSIFIGDDANTPTINGSLFERETDRLLDGLGPRFVDWWMRKPLPVDADL
LPEVVAGFMPPSRFHYARAKLKDDELTYLRKLAYALPTHFVLGRNRRLQGLAAAILKLWE
RSLIAKIAVKWGIPNTDNEQMANELKHLTGGVLLLRNKFFIILFRGKDFLPCQVADLVVK
RENELKICQLNEEGARLKAIETSFTDDELVVKATKIGTLNEFQDIQVRFKELAKGYRDSK
LQLEAEKEKLERELRIQEHKLLILKSKIEKSARELSKLNSAWAPADQDADLEMMTEEERE
CLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRTAKFLEAE
TGGILVSIDKLKEGHAIIIYRGKNYRRPQRLLNNLLTKRKALCRSLEMQRIGSLRFFAYQ
RQHSIRELKFQLAQLQESEERT
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctcttttcctccaatttttctcttacaatcccattgcttcctctttaaat
ccagcaaccaacaaaagtagcttaaacaatgcccaaaatcctaaatttgccaccaacaaa
aacacagaattcacactcttatcagtcccaaattcccaatccaatgcccccattaaagtg
ccaacagctccatggatgaagggtccactccttctccaacttcatgaattaattaatctt
tcaaaacccagaaacaaaaactcttcaaataatgcaaatattgaaaaatctgacaaggta
ttgacaggtaaagaaagtggagtaagagggaaaaaagcaatggaaaagattgttaagagc
attgaacaactgcaagagaatcaagctctagagaaaacccaatgtgattctcaggcttat
gagaaaacccaactcgattctgaggcttttgagataggagaaaagttgggtctgattaga
gaacatggggattttggtgttaataaaaagttgaaaccttgggagagagaagagaagttt
gtgtattggagaataaagaaggagaaggctgtaactaaggctgagttgattcttgaaaag
gagttgcttgagagattaagaactgaggcttcaaaaatgaggaaatgggtgaaggtgatg
aaagctggggtgacacagagtgtagttgatcagataagatatgcttggagaaacaatgag
cttgcaatggttaaatttgatcttcctttgtgtcggaatatggacagagcaagagaaatt
gtggagctgaagactggaggcttggttgtttggactaggaaagattcccttgttatatat
agaggatgcaattatcatttgacaaaaagttctcatgtcagtaccatggatgaaaaaatt
ggcagcaaggacggggaagaggaatatataccaaccagcatctttataggagacgatgct
aatactccaacaattaatggatctttgtttgagagagaaactgataggttactggatggc
ctgggacctcgttttgttgactggtggatgcgaaagcctctgccagtagatgcagatttg
cttccagaagtggttgctggttttatgcctccatcaaggtttcattatgctagggcaaag
ctgaaagacgacgagttgacgtacttgaggaagcttgcttatgctctacctactcatttt
gtccttgggaggaacagaagacttcaagggttagctgctgctatcttaaaattgtgggaa
aggagtcttatagctaagattgctgtaaagtggggaattccaaatactgacaatgagcaa
atggcaaatgagctgaagcatcttacaggaggagttttattgctccgtaataagttcttt
ataatactttttagaggcaaagattttcttccttgccaagttgcagatttggtagtgaag
agggaaaatgagcttaaaatatgccagctgaatgaagaaggtgcaaggttgaaggcaatt
gaaacatcttttacggacgatgaactagtggtaaaagctaccaaaattggaactttaaat
gaattccaggatatacaagtcagatttaaggagcttgcaaaaggatatagggactctaaa
cttcagttagaagctgaaaaggaaaaattagagagagaactgagaatccaagagcacaag
cttcttattcttaaaagcaagatagagaagtcagctagggagttgtcaaagttgaattct
gcctgggcgccagctgaccaggatgccgacctggaaatgatgacagaagaagagagagaa
tgcctaagaaagataggactgaagatgcgtagtagcttactgcttggtaggcgtggggtt
tttgatggtgttatagaaggtttacatcagcactggaaacacagagaagtggtcaaggtg
atatctctgcagagaatgtttgcacaggtcattcgtactgcgaaatttcttgaagcagaa
actggtggaattttggtatcaatagacaagctgaaagaaggtcatgcaataataatttac
cgtggaaaaaattatagacgtccccaaaggcttctcaataatcttttgactaaaagaaag
gcattatgtagatctcttgaaatgcagaggattggatcgttgaggttctttgcatatcag
aggcagcattcaatcagagaattgaaattccaattggcacagcttcaggaatctgaggaa
agaacatga
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