Ricinus communis (castor bean): 8261825
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Entry
8261825 CDS
T01087
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8261825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8261825
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
8261825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Tau95
DUF1672
Motif
Other DBs
NCBI-GeneID:
8261825
NCBI-ProteinID:
XP_002534300
UniProt:
B9T7T1
LinkDB
All DBs
Position
6:complement(26422732..26427125)
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AA seq
278 aa
AA seq
DB search
MDDSATNTNSNKNSNSKNSSGNGGVVIGGTLETARAEKAVWLMKCPALVSNSLKKNPSSP
DNDPSRPIAKVILSINPLNSNDDNSSRQFTMELAGNESGNAPKSYSMDMSEDFIPMFVLS
ESAQGKVSVEGKILYKFDMRPHTENLENYAKMCRERTKKYMTKGRQIQIIDNDNGSHMRP
MPLMIASGSNDKKKPPAKATDVKRTRRDRGEMEAIMFKLFERQPNWTLRQLIQETDQPEQ
FLKDILKELCVYNNKGTNQGSYELKPEYKRSTEESSPS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggacgactctgctaccaataccaacagcaacaagaatagtaatagcaaaaatagtagt
ggcaatgggggtgttgttattggtgggactttagagacggcaagagcagagaaagctgtg
tggttaatgaaatgtcctgctttagtttctaactctttaaagaaaaacccatcttctcct
gataatgatccttctcgtcctattgctaaagttattctctctatcaatcctcttaactcc
aatgatgataattcttctcgtcagtttactatggaattggctggcaatgaatctggaaat
gcacccaagtcttactctatggatatgtctgaagacttcattccaatgtttgtgctttct
gaatcagctcaaggaaaggtttctgttgagggaaaaatactatataaatttgacatgagg
ccccatactgaaaaccttgagaactatgcaaaaatgtgtcgtgaaaggacaaagaagtat
atgaccaaaggcagacaaatacagatcatcgacaatgacaatgggagtcatatgaggccc
atgccattgatgattgcttctggatccaatgataagaagaaaccacctgccaaggcaaca
gatgtaaaaagaactagaagggatcgtggagagatggaagcgatcatgtttaagctcttt
gaaaggcagccaaattggacattgagacaactgattcaagagacagaccaacctgaacaa
tttctgaaagatatccttaaagaactttgtgtctataacaacaagggaactaatcaagga
tcatatgagctaaagccagaatacaagagatcaaccgaggaatcaagtcctagttaa
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