Ricinus communis (castor bean): 8261901
Help
Entry
8261901 CDS
T01087
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8261901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8261901
03036 Chromosome and associated proteins [BR:
rcu03036
]
8261901
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8261901
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
8261901
Chromatin remodeling factors
BAF complex
8261901
PBAF complex
8261901
GBAF(ncBAF) complex
8261901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
HDA2-3
AAA_14
Motif
Other DBs
NCBI-GeneID:
8261901
NCBI-ProteinID:
XP_015584288
UniProt:
B9RDU3
LinkDB
All DBs
Position
1:2127068..2138396
Genome browser
AA seq
2248 aa
AA seq
DB search
MQSGGGGPSRVGPAGRAASTSSAASPSSSSSAASPQLGFDSVQQHHQHQQLGSRQALQHQ
LLRKPEGNEALLAYQAGAFQGVIGGSNFAPSPGSMQMPQQSRKFFDLAQQQNSSQDGQNR
NQAVEQQVLNPVHQAYLQFAFQQQKSALVMQSQQQAKMGMLGPATGKDQEMRMGNSKMQE
LTSIQAASQAQASSSKNSSENFTRGEKQVEQGQQLAPEQRNEQKPPTQPPGVGQAMPANV
VRPMQAPQAQQSIQNMVNNQLAMAAQFQAMQAWALERNIDLSLPANANLMAQLIPLMQSR
MAAQQKANESNAGAQASPVPVSVSKHQVASPPVASESSPHANSSSDVSGQSGPPKARQTV
PSGPFGSSSNSGIVNSANSLAMQQLAFQNRENQAPPRTGVILGNGMPSMHPSQLSANMSQ
GGDQNMPAKNAINSPETLQMQHLKQMNRSSPQSAGLSNDGGSSNHNSSQGTPSVQMAQNR
VGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLELQLQQQFLPAGGSNQDRS
GGKILEDQAKHLESNEKNSQAMPSMNGQNAAKEEAVAGVEKPTVSASNIEGPTAVKDPTT
SVAVRKEEQQTATFPVKSDQEVERSLQKTPVRSDVTADKGKAVAPQVPVSDAVQAKKPAQ
TSVAPQPKDVGSARKYHGPLFDFPFFTRKHDSIGSSGMINTNNNLILAYDVKDLLFEEGL
EVLNKKRSENLKKINGLLAVNLERKRIRPDLVLRLQIEEKKLKLLDLQARLRDEVDQQQQ
EIMAMPDRPYRKFVRLCERQRMEQARQVQASQKAMRDKQLKSIFQWRKKLLEAHWGIRDA
RTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTNIEGDAAER
YAVLSSFLTQTEEYLHKLGSKITAAKNQQEVEEAANAAATAARLQGLSEEEVRVAAACAG
EEVMIRNRFMEMNAPKDSSSVSKYYSLAHAVNERVIRQPSMLRAGTLRDYQLVGLQWMLS
LYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHNWLP
SVSCIYYVGSKDQRSKLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRM
KDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPF
QKEGPPHDAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSA
IQSAVYDWIKSTGTLRVDPEDEKRRAQKNPIYQPKVYKTLNNRCMELRKACNHPLLNYPY
FNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRI
DGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQA
VARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTIDLEDDLAGKDRYMGSIESLI
RNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHNVPSLQEVNRM
IARSEDEVELFDQMDEDLDWTEEMTSYDQVPKWLRASTRDVNAAIANLSKKPSKNILYAS
SVGMESSEVETERKRGRPKGKKSPNYKEVDDDNGEYSEASSDERNGYCAHEEEGEIREFE
DDESSGAVGAPPINKDQSEDDGPTCDGGYEYPRASTSARDNHILEEAGSSGSSSDNRRIT
RIVSPVSSQKFGSLSALDARPGSISKKLPDELEEGEIAVSGDSHLDHQQSGSWIHDREEG
EDEQVLQPKIKRKRSIRLRPRHTMERPDEKSGIEVQRGDACLLPFQGDHKYQAQLRTDAE
MKGFGEPNPSRHDQSDSSKNRRTIPSRRIANTSKLHASPKSSRLHMQAAPPEDAAEHSRE
SWDGKVTNASGSSVLGSKMSDVIQRRCKNVISKLQRRIDKEGQHIVPVLTDLWKRMESSG
YMSGAGNNLLDLRKIETRVDRLEYNGVMELVVDVQFMLKGAMQFYTFSHEARSEARKVHD
LFFDILKIAFPDTDFREARNALSFSNPLSTSSSAPSPRQAAVGQSKRHRLINEVEPDNGS
AHKPIQRGSIPSGDDTRVKVHLPKETRHGTGSGSTREQYQQDDSPLHPGELVICKKKRKD
RDKSMAKSRPGSSGPVSPPSMARTITSPVQGSASRETRMSQQNPHQQGWGNQPQPANNGR
GGGGGSVGWANPVKRLRTDAGKRRPSHL
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggtggtggtgggcccagccgggtgggaccggctgggcgtgcggcgtccacg
tcatcagctgcatcaccatcttcctcttcttctgcagcatcaccacagttagggttcgat
tccgtacagcaacaccaccagcaccagcaattaggttctaggcaggcattgcaacaccaa
ttacttagaaaacctgaaggaaatgaagcccttctggcttatcaagctggtgcttttcaa
ggagtcataggaggaagcaattttgctccatctccaggttcaatgcaaatgcctcaacag
tccaggaaattctttgatttggctcagcagcaaaattcctcccaggatggccagaatagg
aatcaagctgtcgagcaacaagttctaaatccagttcatcaagcgtatcttcagttcgct
tttcagcaacaaaaatcagccttggtcatgcagtcacagcaacaagctaaaatgggaatg
ttgggccctgccactggtaaggatcaggaaatgcggatgggaaattcaaaaatgcaggaa
ctcacgtccattcaggcagctagtcaggctcaggcatcatcctccaaaaactcatctgag
aactttactcgtggcgaaaagcaggtggagcaaggacaacagctagcccctgaacagagg
aatgagcaaaagcctccaacacaaccccctggcgttggacaagcaatgcctgctaatgtt
gtaaggcctatgcaggcaccacaggctcagcaaagcatccaaaacatggtgaacaaccag
cttgcaatggctgctcagtttcaagcaatgcaggcatgggcacttgaacgcaatattgat
ctgtcactacctgcaaatgcaaacttgatggcacagctcattccactcatgcagtcaagg
atggctgctcagcaaaaggccaatgaaagcaatgcaggtgcacaggcttcgcctgttcct
gtgtcagtgtcaaagcatcaagttgcttctccacctgttgctagtgagagctctccacat
gctaattcctctagtgacgtctctgggcagtctggccctcctaaggcaaggcagactgtt
ccatctggtccttttggatctagttccaattcagggattgtgaatagcgccaacagcctt
gcaatgcaacagcttgcctttcaaaacagagagaaccaagcgcctcctagaactggggtt
atactgggaaatggaatgccttctatgcatccttctcaattatctgcaaatatgagccaa
ggtggagatcaaaatatgcctgcaaaaaatgctataaatagcccagaaacattacaaatg
cagcatctcaagcaaatgaatcgctcttctcctcaatccgctggtctttctaatgatgga
ggctcaagtaatcacaactcatcacaagggacgccttccgtccagatggcacaaaatcgg
gttgggttcaccaaacaacaattacatgttcttaaagcacaaatactagcatttagacga
ttgaagaaaggagaaggtacacttccacaagagcttcttcgagccattgctccaccaccc
cttgagttgcaattgcagcagcaatttcttcctgcaggaggaagtaatcaggacagatct
ggtgggaagattttggaggaccaagcaaagcatctcgagtctaatgagaagaactctcaa
gcaatgccatctatgaatggacagaatgctgcaaaagaggaagctgtggctggagtggag
aaaccaactgtctcagcaagtaatatagaaggtccaacagctgtgaaggaccctacgacc
tcagtagctgttcgaaaagaagagcagcaaactgctacttttcctgttaaatctgaccag
gaggtggaacgaagtcttcagaaaactcctgtgagaagtgatgttacagcggacaaggga
aaagctgttgctccacaggttcctgtgtctgatgcagttcaagctaagaaacctgcacaa
acaagcgttgcaccacagccaaaagatgttggctctgccagaaagtatcatggaccacta
tttgattttcccttttttactaggaagcatgattcaattgggtcttcagggatgattaac
actaataataatctaatattggcatatgatgtcaaagatcttctttttgaggaaggcctg
gaagtgctcaacaagaagagatcagaaaatttgaagaaaattaatggtctattggctgtg
aacttagagaggaaaagaattagaccagatcttgtgttacggttacaaattgaagagaaa
aagcttaagcttctagatctacaggcacgtctaagggatgaagttgatcaacagcagcag
gagataatggcaatgcctgacaggccatatcggaagtttgttcgcttatgtgagcggcaa
cggatggagcaagcaagacaagtacaggcctctcagaaagccatgagagacaaacaattg
aaatccatcttccaatggcgtaagaagcttcttgaggctcattggggtatccgagatgca
cgaactgctcgcaacagaggagttgccaaataccatgagagaatgttgagagagttttca
aagagaaaagatgacgaccggaataaaagaatggaggctttgaagaacaatgatgttgag
aggtacagggaaatgttgctggagcagcagaccaacatcgaaggtgatgctgctgaaaga
tatgctgttctctcatcatttttaactcagacggaagaatatcttcataaactgggaagt
aagataactgcagccaagaatcagcaggaagtagaggaggcagcaaatgctgcagcaaca
gctgcacgactgcagggtctgtcagaagaagaagtaagggtagcagcagcttgtgctgga
gaggaagtaatgataaggaatagatttatggaaatgaatgcacccaaggatagttcatct
gttagcaaatactacagtcttgcccatgctgtcaatgagagggtcataaggcaaccatcc
atgttacgagctggaactttacgagattatcagcttgtagggttgcagtggatgctttct
ttgtataataacaaattgaatggaattctagcagatgagatgggtcttggaaagactgta
caggtgatggcattgattgcttatctgatggaattcaaaggaaactatggcccacatctt
ataattgttcctaatgctgttttagtaaattggaagagtgagttacataactggctgcca
tctgtatcatgcatttactatgtcggcagcaaagatcaacggtcaaaactattttcccaa
gaggtttcggctatgaagtttaatgttctcgtaacaacgtatgaatttataatgtatgat
cgatcaaaactttctaaagtggactggaagtacatcataattgatgaagcacagagaatg
aaagacagggaatcagttttagcccgtgatcttgacagatatcgctgccagaggcgctta
cttctcacagggacaccattacagaatgatttgaaggagctttggtctcttttaaatcta
cttctaccagaagtatttgacaatcggaaagcatttcatgattggttctcaaaacccttt
caaaaggaaggtcctccacatgatgcagaggatgactggttggaaactgaaaagaaggtt
ataatcattcaccgacttcatcaaattctggagccttttatgcttagacggcgtgttgaa
gatgtggaaggttcacttccacccaaggtttccattgttttgagatgtagaatgtctgct
attcaaagtgctgtatatgattggatcaaatctactggtactcttcgagttgatcctgaa
gatgagaagcgcagggcccaaaaaaatccaatttaccagcctaaggtgtacaaaacttta
aataacagatgtatggagctccggaaagcttgcaatcatcctctgcttaattatccatat
tttaatgatttctccaaggatttccttgttagatcttgtgggaaattgtggattctggac
aggatccttataaaacttcaaagaacagggcatcgggtactactctttagtaccatgact
aagctccttgatatattagaggaatacttgcaatggagaagactggtctacagaaggatt
gatggaacaaccagcctggaagatcgtgaatcagctattgtggactttaacagccctgat
tctgattgctttattttcttgctcagtattcgtgcagctggtaggggtcttaatctacag
tctgctgacacggttatcatatatgatcctgatcctaaccctaaaaatgaggagcaggca
gtggctagagcccaccgaattggacagaagagggaagtgaaagttatttatatggaagca
gttgttgacaaaatttctagccatcagaaagaagatgaattaagaagtgggggcacaatt
gatctggaagatgaccttgctgggaaggatcggtacatgggatctatcgagagcctcata
aggaataatattcaacaatataagattgatatggctgatgaggttatcaatgctggtcgc
tttgaccaaaggacaacacacgaagagagacgaatgacattggagacattattacatgat
gaagagcgatatcaagaaactgtccataatgttccatcacttcaggaggtaaatcgcatg
atagccaggagtgaagatgaagttgaattatttgatcagatggatgaagacctggactgg
actgaggagatgacaagctatgaccaggtacctaagtggcttcgagccagtactagagat
gtgaatgctgccatagccaatttatcgaagaaaccatcaaagaatatcttgtatgctagc
agtgtgggtatggaatctagtgaagtggaaactgaaaggaaaagggggcggcctaagggg
aaaaaatctcctaattacaaggaagttgatgacgataatggggaatactcagaggccagc
tctgatgagagaaatggatattgtgcacatgaagaagagggagaaattcgagaatttgaa
gatgatgaatctagtggtgctgttggggcacctcccatcaataaggaccaatcagaagat
gatggtccaacatgtgatggtgggtatgagtatccccgggcttcgacaagtgctagagat
aatcatatactagaagaagctggttcttctggatcctcttctgataatcgaagaattaca
agaattgtgtctcctgtttcttcgcagaaatttggttccctttctgcattagatgccaga
ccaggttctatttctaaaaagctgcctgatgaattggaggaaggtgaaattgccgtatca
ggagattctcacctggatcatcagcaatctggaagttggattcatgatcgcgaagaagga
gaagatgagcaggttctgcaacctaagataaaacgaaaacgtagtattcggcttcgacct
cgccacaccatggaaaggccagatgagaagtctggcattgaggtacagcgcggagatgca
tgtttgttgccgttccaaggagaccataaatatcaagcacagctgagaactgatgctgag
atgaaaggatttggagagcctaatccttccaggcatgatcagagtgattcctccaaaaac
aggagaaccataccgtcaaggagaatagctaatacttcaaaattgcatgcttcacctaaa
tctagcagattacatatgcaggctgctcctccagaagatgctgctgaacattccagagag
agttgggatggaaaagttacaaatgcaagtgggagttcagtgctgggctctaagatgtca
gatgtcatccagagaaggtgtaagaatgttattagcaagctccaaagaagaatagacaag
gaaggtcaacatattgtgcctgtcctaactgatctatggaagagaatggaaagttctggt
tacatgagtggtgctggaaataatcttttggatttgcggaaaattgaaacacgagttgac
agattagagtataatggcgtaatggagcttgtggttgacgtgcaatttatgctaaagggt
gcaatgcaattctataccttctcacatgaggctagatctgaagcaaggaaagtgcatgat
ctcttttttgatatcttgaagattgcatttccagacacagatttccgagaagccagaaat
gcactctctttttctaatccactatctacctccagttctgctccatctccacgacaggca
gctgtaggccaaagcaagagacacaggttaataaatgaggtagaaccagacaatgggtcc
gcccataagccaatccaacgaggttcaattcctagtggtgatgatacgagggtcaaagtc
cacttgccaaaggaaacgaggcatgggactggaagtggtagtacccgggaacagtatcag
caggatgattctccattgcacccaggggagttggttatctgcaagaagaagaggaaagac
agggacaagtcgatggcaaagtcgaggcctggatcaagtggtccagtctctccacctagc
atggctaggactatcacaagtccggttcaaggttcagcctccagggaaacaagaatgtcc
cagcagaatccccatcagcaagggtggggtaaccaacctcaaccagcaaataatggtcgt
ggcggcggcggtgggagtgttggttgggcaaatccggtgaagagattgaggacagatgct
ggtaaaaggaggccgagccatttataa
DBGET
integrated database retrieval system
