Ricinus communis (castor bean): 8261914
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Entry
8261914 CDS
T01087
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8261914
Membrane trafficking [BR:
rcu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
8261914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
8261914
NCBI-ProteinID:
XP_002511895
UniProt:
B9RDV6
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All DBs
Position
1:2205714..2218390
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AA seq
1124 aa
AA seq
DB search
MYMAYGWPQVIPLEPGLCPSSQQIIYLKVINRLLLVVSPSHLELWSSSQHKVRLGKYKRD
AESVEKEGENLQAVWSPDAKLIAVLTSSLFLHIFKVQFSEKRIQIGGKQLSGLFLANISL
LLSEQVPFAEKDLTVSNIVSDNKFMLLGLSSGSLYSISWKGEFCGSFELDPCPHESTEAS
ILPHSLVNGLASGGVLGDFVSNHNISKKSAITRLEFCFPMRLLLVLYSDGQLVSCSVSKK
GLKQAESIKVEKKLGSGDAVCTSVASEQQILAVGTRKGIVELYDLTESASLIRTVSLCDW
GYSVDATGSVSCIAWAPDNSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLSSVSSPVVKP
NQDCKYEPLIGGTSLLQWDEYGYKLYAIEEGSLERMLAFSFGKCCLSRGVSGMTYVRQVI
YGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMYLAVAGLHGLILYDM
RLKKWRVFGDITQEQKIQCKGLLWLGKIVVVCNYIDSSNMYELLFYPRYHLDQSSLLCRK
PLLAKPMVMDVYQDYILVTYRPFDVHIFHVNLHGELTPHRTPDLQLSTVRELSIMTAKSH
PAAMRFIPDQIVREGAFKNHISPSSDLLVREPARCLILRANGDLSLLDLDDGRERELTDS
VELFWVTCGQSEEKTNLIEDVSWLDYGHRGMQVWYPSPDVDSFKQEGFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRLSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALRL
AQLSAQKPHFSHCLEWLLFTVFDTEISRQSANKNQRSVPKHAGNCSLLEKTCDFIRNFSE
YLDVVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQ
YCALRLLQATLDESLYELAGELVRFLLRSEKEYDQTSTDSDRLSPRFLGYFLFRSSYRKT
SLDKSTSFKEQSAHVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERFGS
ARLENFASGLELIGQKLQMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFDL
FRHDMRLWKAYSITLKSHTAFIEYQDLLEALEERLAFVPELEEK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatggatggccacaggtgatacctctagagccaggactctgtccatct
tcacaacaaattatatatctcaaagtcataaatcgtctcttgctcgtagtctctccttct
cacttggagctctggagctcctctcagcataaagtgaggttaggcaagtataagagagat
gcggagtctgttgagaaagagggagagaatttacaggctgtttggagtcctgatgccaaa
ttgatcgctgttcttacctcatctctctttcttcacatcttcaaggtccaattctctgaa
aagagaatacaaattggagggaagcaattgtctggtttgtttcttgctaatatatctctt
cttcttagcgaacaggttccttttgcagaaaaagacttgacagtgagcaatattgtaagt
gataacaaatttatgctacttgggctttctagtgggtccttatatagcatctcttggaag
ggggagttctgtgggtctttcgaacttgatccctgtccacatgaaagcactgaagcctct
attctaccacactctttagttaatggccttgcttctggaggggttctaggagattttgta
tctaatcataatatcagcaagaagtctgctatcacacgattggagttttgctttccaatg
aggctgctacttgttttatactctgacggacaactggtatcatgctctgtaagcaagaaa
gggttaaagcaagctgaatctattaaagttgaaaagaagttgggttctggtgatgctgta
tgtacttcagtagcttcagagcaacaaatccttgcggttggtactagaaaagggattgtc
gagttatatgacctaacagaatctgcatcactcatccgtacagtgtcattgtgcgactgg
gggtattcagtggatgccactggttctgtcagttgtattgcatgggcgcctgataattct
gcgtttgctgttgggtggaagttaagaggactaacagtttggtctgtttctggctgtcgt
ttgatgtcaacaatccggcaaattggtctaagttctgtatcttcaccagtagttaagcca
aaccaagattgtaaatatgagccactgataggtggcacctcattgttgcagtgggatgaa
tatggatataaactctatgccattgaagaaggatctttggagagaatgcttgctttttct
tttgggaaatgctgtcttagcagaggagtatctggcatgacctatgtgcgccaggtgatt
tatggagaagataggttgctggttgtacagtctgaggatactgacgaactcaaaatttta
catctgaatcttccagtttcgtatatctcacaaaattggcctgttcaacatgtggcagct
agcaaggacggaatgtacttagcagttgctggtcttcatgggttaattctatatgatatg
cggttaaaaaagtggcgagtgtttggagatattactcaagaacaaaagattcagtgcaaa
ggtttgttatggctgggaaagattgtcgttgtctgcaactacattgattcttctaacatg
tatgaattgctcttttatccaaggtatcatctcgaccagagttccttgctttgccggaag
ccattacttgccaagccaatggtgatggatgtctatcaagattatatacttgtcacttat
cgcccatttgatgtccatatattccacgtgaacctacatggtgaactgacacctcacaga
accccagatttgcagctttctacagtacgagaactctcaatcatgactgcaaagagtcat
cctgctgcaatgcgcttcatccctgatcagatcgtaagagagggcgcttttaagaatcat
atttcaccatcttcagatttattagtcagagagcctgctagatgtttgatactgagagca
aatggggacctgtcacttttggatttggatgatggacgtgaaagagagctcaccgactct
gttgaattattctgggttacctgtggtcaatcagaggagaaaacaaatctaattgaggac
gtttcttggttggattatggtcaccgagggatgcaggtctggtatccatctcctgatgtt
gattcttttaagcaggagggttttttgcagttggatccagagctagaatttgatcgtgaa
gtttatcctctgggccttcttccaaatgctggtgttgttgttggtgtctctcagagattg
tctttttcagcatgtactgagtttccatgttttgagccatctcctcaagctcaaactata
ttgcattgcctactcaggcaccttcttcagagggacaaaagtgaagaggccttaaggttg
gcacagttatctgcacaaaagcctcatttttcccattgtttggaatggcttctttttact
gtatttgacacagaaatttccaggcagagcgcaaacaagaatcagagatcagttcctaaa
catgctgggaattgctctcttttggagaagacctgtgattttatcagaaatttctcagag
tatcttgatgtagttgtgagcgttgcaagaaaaactgatggccgacactgggcggactta
ttcgcagctgctggaagatcaacagagttgtttgaggaatgcttccagcggagatggtac
cgcacagcagcttgctatatacttgtcattgctaaacttgaaggacctgctgtaagtcaa
tattgtgctctacgtttactacaggcgacacttgacgaatctttatatgaactcgctgga
gaactggtgcggttcttgttgagatctgaaaaagaatatgaccagacatcgacagattcg
gacaggctgtctccgagattcttgggttattttctattccgttctagttacaggaagaca
tccttggataaaagcacctcattcaaagagcaaagtgctcatgttgcttccgtgaagaac
attctagaaagccatgctagctatctgatgtcagggaaagaactctccaagcttgttgca
tttgtaaaaggcactcagtttgatttagtggaatatcttcaaagagaaagattcggttct
gctcgcttggaaaatttcgcatcaggcctggaactaattgggcaaaagctccaaatgggt
acactgcagagccgtttggatgcagagtttctgttggctcatatgtgttctgtcaagttc
aaggagtggatagttgtcctggccactctcttaagacgatctgaggttctttttgatctt
tttcggcatgacatgcgtctatggaaggcatatagcatcacccttaagtcacacactgcc
tttattgaatatcaagatctacttgaagccttggaagagaggctcgcatttgtcccagag
ttggaagagaaatga
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