Ricinus communis (castor bean): 8262033
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Entry
8262033 CDS
T01087
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8262033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8262033
03110 Chaperones and folding catalysts [BR:
rcu03110
]
8262033
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8262033
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8262033
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8262033
Messenger RNA biogenesis [BR:
rcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8262033
Chaperones and folding catalysts [BR:
rcu03110
]
Heat shock proteins
HSP60 / Chaperonin
8262033
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8262033
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8262033
Exosomal proteins of other body fluids (saliva and urine)
8262033
Exosomal proteins of breast cancer cells
8262033
Exosomal proteins of colorectal cancer cells
8262033
Exosomal proteins of bladder cancer cells
8262033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8262033
NCBI-ProteinID:
XP_002534347
LinkDB
All DBs
Position
8:complement(15687978..15692031)
Genome browser
AA seq
586 aa
AA seq
DB search
MATSNAISTASILCSPKQGNLRRRTNQQQNQRLNYGQSSRRFTVRANAKDIAFDQNSRTA
LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLIEELEKKAR
PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID
RGYISPQFVTNPEKLICEFENARVLVTDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG
EALATLVVNKMRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQ
LGIARKVTITKDSTTLIADAASKDELQARIAQLKRELAETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTVVPAIKEKIKDA
DERLGADIVQKALVAPASLIAQNAGIEGEVVVEKVKAREWEIGYNAMTDKYENLVEAGVI
DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPRAPAAAPPQGLMV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctaatgctatttccactgcttccattctatgctctcccaaacaggggaat
ttgaggaggagaacaaatcagcagcagaatcaaaggctgaattacgggcaatcatctaga
agatttacagtgcgtgctaatgccaaagatatcgcctttgaccagaattccaggactgca
cttcaatctggcattgataagcttgctgatgctgttgggcttacacttggtcctaggggg
agaaatgttgtcttggatgagtttggaagtcccaaggtagtcaatgatggagtaacaatt
gcccgagcaattgagttacctgatcccatggagaatgctggtgcagctctgataagagag
gtcgcaagtaaaactaatgactctgctggtgatggaacgacaactgcatcagtccttgca
cgggaaataattaaattagggcttttaagtgtcacttctggtgccaacccagtctcaata
aaaagagggattgataagaccgtacaaggtttgatagaagagctagaaaagaaggctagg
cctgttaaaggtcgcgatgacattaaagctgttgcttccatttctgctggaaatgatgag
ctcattgggacaatgattgctgatgcaattgacaaggttgggcctgatggtgttctatca
attgagtcatcatcctcatttgagacaacagtagaagttgaagaaggaatggagatagac
agaggttatatctctcctcaatttgtaacaaatcctgagaagttaatttgtgaatttgag
aatgcaagagtactagtcactgatcaaaaaattacggcaatcaaggacataattccgctg
ctggagaagaccactcaattgagagcacctttgctcataattgctgaagatgttactggg
gaggctttggctaccctcgttgtgaacaagatgcgaggtatcctaaatgttgctgccatc
aaagctcctggatttggtgaaaggagaaaagcgttgcttcaagatattgctatcttgact
ggagctgagttccaagccagtgatcttggtttgctcgttgaaaacacatcagtcgagcag
cttggtattgctagaaaagtgaccattaccaaggattccaccacccttattgcagatgct
gcatccaaggatgagttgcaagctaggattgctcaattgaaaagggagttggctgagaca
gattctgtttatgactccgagaaactggctgaaagaattgctaaattgtccggtggggtt
gctgtcatcaaagtgggagctgcaacggagactgagcttgaagaccgtaaactccgaatt
gaggatgccaagaacgctacatttgctgcaatagaggaaggcattgtccctggtggtggt
gctgcattggttcatctctcaactgttgttcctgctattaaggagaagattaaggatgca
gatgagcggctaggtgctgacattgtgcaaaaggcactggtagccccagcttcattgata
gctcagaatgctggaatagaaggcgaggtggttgtggagaaggtaaaagctcgcgaatgg
gagattggctataatgccatgacagacaaatatgaaaacttggtggaggctggagttatt
gacccagcaaaggtgacaagatgtgccctgcagaattcggcatcagttgctggaatggtc
ctgacaactcaagccattgtggtggaaaagcctaagcctagggcacctgcagctgctcct
ccacaaggtcttatggtgtaa
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