Ricinus communis (castor bean): 8262227
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Entry
8262227 CDS
T01087
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8262227
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
90S particles
Other 90S particles
8262227
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_C
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
WD40_like
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
8262227
NCBI-ProteinID:
XP_015574906
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Position
2:complement(24307380..24313963)
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AA seq
501 aa
AA seq
DB search
MKYSNKSKNSKRKGSVKQDPFFNTESKKRRKNEYRDDYIESGGEESDEENNNNNNNNGFS
NSGDEKEREDEKETAQEKRQRLAKAYLEKRREILRREEEEAEEEGEDNGRCEKEGERDSL
VVNMLLKEQLEDSGRLRRAIASRVEKPETVGGFEVLVKHRHSVTAVCLSDDDSKGFSASK
DGTIRQWDVDTGKGEKYQWPNDETLRLHGVKNPDGRATKHSKQVLALAVSTDGRYLATGG
LDRHIHLWDTRAKQHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRSIKIWSVEDRAYVNT
LFGHQSEVLTVDCLRKERVLATGRDRTMQLFKVPEESRLIFRSSASSLECCCFIDNDEFL
SGSDDGNIELWTAQKKKPVYIVKNAHALLIDPKNPEQKDNASLSSGPIACSWVSSVAVCT
GSDLAASGAGNGSVRLWAIDGAPKGIRPLYDLPLVGFINSLAFSKSGRFLAAGVGQEPRL
GRWGRISAAQNGVAIQQLKFL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacagcaacaaaagcaaaaactcaaagagaaaagggtcagtaaagcaagatcct
ttctttaacacagaatccaaaaaacggaggaaaaatgaatacagagacgattacattgag
tcaggaggggaagagtcggacgaggaaaataataataataataataataatgggttttct
aatagcggcgatgagaaagagagggaggatgagaaagagactgctcaagagaagagacag
cgtttggcaaaagcgtatttggagaagcggagagagattttgagaagagaagaagaagaa
gcagaagaagagggagaagataacggtaggtgtgagaaagaaggagaaagagattcttta
gttgttaatatgctgcttaaggagcagcttgaagatagcggcagattaagaagagctatt
gcttctagggttgagaagcctgaaactgttggtggatttgaggtactagtgaagcatagg
cattctgtaactgctgtatgtctatctgatgatgactcaaaggggttttctgcttccaaa
gatggcacaattagacagtgggatgtagatactgggaaaggtgaaaaataccaatggcct
aatgacgaaacactgagacttcatggggtcaagaatcctgatggtcgagctacaaagcat
agcaagcaggttctagcattggctgttagcactgatggacggtatttggcaactggagga
ttggatcgccatattcacttgtgggacacacgtgcaaaacaacatattcaggctttccca
ggtcatagagggcctgtgtcatgcctaacttttaggcaagggacttctgaacttttttct
ggttcatttgatcgatcaatcaagatatggagtgtggaagacagagcttatgtaaataca
ttgtttggtcaccaaagtgaagtattaacagttgattgcctgcggaaagaacgggtgttg
gctactggacgtgatcgaactatgcaattgtttaaggtccctgaggagtcaagattgatc
ttccgttcttcagcatcgtcactagaatgttgttgttttattgataatgacgaattttta
tcgggatcagatgatggaaatattgagctctggaccgcgcaaaaaaagaagcctgtatac
attgttaagaatgctcatgctttgttgattgaccccaagaatcctgaacaaaaagataat
gccagtctttccagtggtccaatagcatgttcctgggtgagttcagtcgctgtctgtaca
ggcagtgatctagctgcatcgggagctggtaatggatctgttcgcctatgggctattgat
ggtgctcccaaaggcattcgacccttgtatgatcttccattggttggatttatcaactct
ttggcattttcaaaatctggaaggttccttgctgcgggagttgggcaggaacctcgacta
ggacgatggggacgaatttcagctgctcaaaatggagtcgcgattcaacagttgaaattt
ttgtag
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