Ricinus communis (castor bean): 8262268
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Entry
8262268 CDS
T01087
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04142
Lysosome biogenesis
rcu04145
Phagocytosis
rcu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
8262268
04142 Lysosome biogenesis
8262268
04148 Efferocytosis
8262268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8262268
Membrane trafficking [BR:
rcu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
8262268
Hops complex
8262268
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
DUF2067
TRIM_CC
Motif
Other DBs
NCBI-GeneID:
8262268
NCBI-ProteinID:
XP_002519636
UniProt:
A0ACL1FTV0
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Position
1:20062279..20073928
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AA seq
597 aa
AA seq
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MAQIPNLDNSPLNLRSLREQSQKELVNILRNIRGNKCLVIDPKLSGSLSLIIQTSILREH
GAELRHLSADPIQTDCTKVVYLVRSRFNLMRFICSHVHNDTSKGLEREYYIYFVPRREVV
CEKVLEEEKIHHLMTIGEYPLYMVPLDEDVLSFELDVTSKKYQVDGDTSSLWHIAKAIHR
LESSFGVIPHVRAKGKASVRVADILNHMQTEEPINSSDMGVPEINTLILLDREVDMVTPM
CSQLTYEGLLDEFLHINNGAVELDASVMGAQQQEGKKMKVPLNSSDKLFKEIRDLNFEVV
VQVLRQKATSMKQDYTEMTTTNQTVSELKDFVKKLNSLPEMTRHINLAQHLSTFTSKPSF
LARLDMEHTIVEAENYDACFEHIEELIHKQEPLVTVLRMLILLSVTNSGLPRKNFDYIRR
ELLHSYGFEHMATLNNLEKAGLLKKQESRSNWVTIKRALQLVVEDTDTANPNDIAYVFSG
YAPLSIRLVQHAVRSGWRPMEEILKLLPGPHSETKRAGFTSSPSSNTLNGAGATVDRVAD
GRRSLVLVVFIGGVTFAEISALRFLSAQEGMAYDLIIGTTELVNGNTLAETYLEHLG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattccaaacttggataactctcccttaaatctcagatcactcagggaacaa
tctcagaaagagcttgtaaacatcctaaggaatattcgaggaaataagtgcttggtgatt
gatccgaagcttagcggctctctttcattgatcatccagacatcaattcttagggaacat
ggtgctgaactgcggcatctttcagcagacccaattcagactgattgcaccaaagtggtc
taccttgttcgttcccgatttaatttaatgagattcatatgctcgcatgttcacaatgat
acatctaaaggacttgagagggagtattatatttattttgtacctcgccgtgaggttgtt
tgcgagaaggtccttgaggaggagaaaattcatcacttgatgaccataggggaataccca
ttatacatggttccgttggatgaggatgttttatcatttgaacttgacgtcaccagcaaa
aaataccaagttgatggtgatactagctctctttggcatatcgcaaaggccattcatagg
cttgagtcttcttttggagtgattccacatgtgagggccaaaggcaaagcatcagtacgt
gttgctgacattctcaatcacatgcagactgaagaaccaatcaactcctctgatatgggt
gttccagagataaatacgctcatccttctggacagggaggtggacatggtcactcccatg
tgttctcaactaacatatgaaggactgctggatgagtttttgcatatcaataatggtgct
gtggagcttgatgcatctgtaatgggtgctcaacaacaagagggaaagaagatgaaagtt
ccacttaattcaagtgacaagctgttcaaggagattcgggatctcaactttgaagtcgtt
gtccaggtcctacgacaaaaagcaacatctatgaagcaggactacacggagatgacaact
actaaccagacagtgtctgagttgaaggattttgtaaaaaagctcaattcattgccagaa
atgactaggcatataaatcttgctcagcatctgtcaacattcacatccaagccatctttt
cttgcgcgacttgacatggagcatactattgtcgaggcagagaactatgatgcatgtttt
gagcatattgaagaactgatccataagcaggaacctcttgtcactgttctacgtatgctc
atcttactatctgttacaaactcagggttgcccagaaagaattttgactatataaggagg
gagctactccacagctatggatttgaacatatggctactttgaacaatttagaaaaggcc
ggattgcttaaaaaacaggaatcaagaagcaactgggtgactatcaagcgtgctctgcaa
cttgtggttgaagatactgacactgccaacccaaatgacattgcttatgtcttttctgga
tatgcaccgctaagtattcgtcttgtccagcatgctgttcgatcaggatggcgtcccatg
gaagaaattttgaagctgttgcctgggccacactcagaaaccaagagagctgggttcaca
agcagtccatcttctaacacattgaatggagctggagcaactgtggacagagtagctgat
ggtaggcgctccctagtacttgttgtattcattggaggggttacatttgcagaaatttct
gctctccgcttccttagtgcacaggaagggatggcatatgacttgattattggaacaaca
gagcttgtcaatggaaataccttggctgagacatacttggagcatttgggttga
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