Ricinus communis (castor bean): 8262566
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Entry
8262566 CDS
T01087
Name
(RefSeq) auxin response factor 1 isoform X1
KO
K14486
auxin response factor
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8262566
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
8262566
NCBI-ProteinID:
XP_002527834
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Position
6:complement(17021878..17027018)
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AA seq
628 aa
AA seq
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MSSVSNPEMCFKIERNTIWYRQEIHQAELWCLGGIGCPSWRQVQFQNCCNNALYKELWDA
CAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASLNLPSKILCKVINVQCKAEP
ITDQVYAQIMLLPEPEQIDVISPDPPLPEPERCVVHSFRRILTVSDISSHDHFFVDQKHA
EHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLTTGWSAFVSSKKLVSGD
MFIFLRGENGELRVGVRRLMGRKTNILSSATSNQIRHSLLAVASYAISTGSLFCVFYEPR
TSRSEFIVSVNKYIEARNHKFCIGMRFLMRFEGEEVPIERINGTIVSMETSPRWPDSEWR
CFKVRWDEPSLIVHPERVSPWEMENISSSSQPVPRTKRSRSSSPGAMEISPSSTQPGPRI
KQLRSTVFLSQTPDFGMWIFPAEVPGFSNCDLYLSSSSSTNSKTYSSDFRGDSSQASTSP
NRVVYVTESAPSVNKDFGMEEDGCPVLSLENESDQHSETANINQSEKLSVISCDTEKLCS
KKQITSCAEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKKWLIVYTDA
DSEMKLVGDYQWEVVCNMVKKILIYRLG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggtatcgaacccagaaatgtgttttaaaatagagaggaataccatatggtac
cggcaggaaattcatcaagctgaattgtggtgcttaggaggaataggttgccccagctgg
agacaagtgcaatttcaaaattgctgtaataacgctctatacaaggaactgtgggacgca
tgtgctggacctcttgttacccttcctcgagaaggggaacgagtttattattttccacaa
ggtcatatagagcagcttggagctccaattcagcagcagtcagagcatcaaatggcgtca
cttaatcttccgtccaagattctatgtaaagtaataaacgttcagtgtaaggctgaaccc
ataacagatcaagtttatgcacaaataatgctgcttcctgaaccagaacaaatagatgtt
attagtcctgaccctccactgccagaacctgaaagatgtgttgtccattcatttcgtaga
atacttactgtttcagacataagcagccatgatcacttctttgttgatcaaaagcatgca
gagcattgtctaccaccattggacatgtcccaacagctaccttggcaagaattggttgca
actgatctgaatggcaataagtggcatttccaacacatttttcagggcaaatcaaacaaa
cacttgctcacgactgggtggagtgcatttgtcagctcaaaaaagctagtgtcaggggat
atgttcatctttctaagaggagaaaatggagaacttcgtgttggagtaaggaggcttatg
ggaagaaaaacaaatatattgtcttctgctacttctaatcagatcaggcattctcttctt
gctgttgcttcttatgccatttcaactggaagtcttttctgtgtcttctatgaaccaaga
actagtcggtctgagttcattgtaagcgtcaataagtacattgaagctcggaaccacaaa
ttttgtattgggatgagatttctgatgagatttgagggtgaagaagttcctatagaaaga
atcaatggcacaattgttagtatggaaacatcaccaagatggcctgattctgagtggaga
tgctttaaggttcgatgggacgaaccgtctttaattgtgcatccagaaagagtgtcgcca
tgggaaatggaaaatatttcttcaagctcccagcctgtgccaaggaccaagcgctcacga
tcttcatcaccaggggcaatggaaatttctccttcaagcacccaacctggaccaaggatt
aagcagctgcgatccaccgtttttctttcacaaactccagattttggtatgtggatattc
ccagctgaagtgcctggtttctcaaattgtgatctctatctatcttctagttcctctacc
aattcaaaaacctactcttctgattttagaggcgatagttcacaagctagcacttcaccg
aaccgtgtggtatatgttacggagtctgctccttctgtcaacaaagactttggaatggag
gaagatggttgtccagtcctcagtttggaaaacgagtctgatcaacattctgagactgca
aacattaatcagtctgaaaagctttcagtaataagttgtgatactgagaagttatgctca
aagaagcaaatcacaagttgtgcagaggttcgcatgcaaggtattgctcttgggagatct
attgatctgacaaagttcaaatgccatgaggacctgataaaggagctcgagaacatgttt
gagattgaaggtgagctcagtggatccacaaagaaatggctaattgtctacactgatgca
gacagtgaaatgaagttggttggggattaccaatgggaagtggtctgcaacatggtgaag
aagattctgatctatagacttggctag
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