Ricinus communis (castor bean): 8262567
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Entry
8262567 CDS
T01087
Name
(RefSeq) auxin response factor 1 isoform X1
KO
K14486
auxin response factor
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8262567
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
8262567
NCBI-ProteinID:
XP_002527835
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Position
6:complement(17007378..17013944)
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AA seq
679 aa
AA seq
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MAFATYNHMPIGQPHTGGCNDALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASM
HQGLEPQMPSFDLPSKILCKVVNVQRKAEPETDEVYAQITLLPDPDQSEVTSPDTPLPEP
ERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHF
RHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSV
ISSQSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKM
RFEGEEVPERRFSGTIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLV
ATTPSNSQPVQRNKRARPSVLPSTPDISSLGMWKPQTESTAFSYGDFQRGRDLYPSHNFS
TSAKTNYLGFSGNSPLSGVSPNSLYRPNRVESVTDSFVPVIDKDSGERRQGSGNGYRLFG
IQLVGNSNAEETSPLITTSGMVGDDRPVVSFDAESDQHSEPSNINRSEIPSISCEPEKSC
LRSPQELQSRQIRSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSGFSKK
WQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLSPKSKLPVNEEIKAAKADD
DVDTTVNMEDRSSIVGPGC
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgcaacttacaatcatatgcccattggacaaccccatacagggggatgcaat
gatgctctgtataaagaactatggcatgcttgtgctggacctcttgtcaaccttcctcgt
gaaggggagcgagtttattattttccacaaggtcacatggaacagcttgaagcttcaatg
catcaagggttggaaccgcagatgccttcattcgatcttccttcaaaaattctttgtaaa
gtggtcaatgttcagcgtaaggctgaacctgaaacagatgaagtttatgcacagattaca
ctacttcctgatccagatcaaagtgaggttactagccctgatactccactccctgaacct
gaaagatgcacagttcattcattttgcaagacacttactgcttcagacacgagcactcat
ggtggtttttctgtacttcgaaggcatgcagatgattgtttacctccactggatatgtcc
caacagccaccttggcaggaactagttgccactgatctgcacggaaatcaatggcatttc
cgtcacatttttcggggtcaacctagacgtcacttactcacaactgggtggagtgtcttt
gttagctcaaaaaagttagtggcaggagatgcatttatcttcttgaggggagaaaatgga
gaacttcgtgttggagtaaggaggcttatgagacaacagacaaatatgccatcttctgtc
atatctagccaaagcatgcatcttggggttctcgccactgcttctcatgccattgcaact
ggaactcttttttctgtcttctacaagccaagaacaagtcgatcagagttcattgtaagc
gtcaataagtatcttgaagctcggagccacaagctttctgttgggatgaggtttaagatg
agatttgagggtgaggaagttcctgagcggaggttcagtggcactattgttggtgttggg
gataatgtgtcatctggatgggctgattcagaatggagatccttgaaggttcaatgggat
gaaccgtcttcaatcttgcgcccagatagagtatcatcgtgggaattggagccacttgtt
gcgaccactccttcaaattcccaacctgtgcaaaggaacaagcgggctaggccatctgtt
ttaccttcaacaccagacatctcttctcttggcatgtggaaaccccaaacagaatctact
gctttctcatatggggactttcaacgtggacgggatctttatccatcacataatttctcg
acatctgcgaagaccaactatcttggcttcagtggcaatagtccactctctggagtttcc
cccaactcattgtatcggcctaaccgagtggaaagtgttacagattcttttgtcccagtc
attgacaaagattctggagagaggcgacaaggcagtggaaatggctataggctttttggg
attcaacttgtggggaactccaatgcagaagaaacttcaccgttgattactacatctgga
atggttggggatgatcgtccagttgtgtcttttgatgccgagtctgatcagcattctgag
ccatctaatattaatcggtctgaaatcccttcaataagctgtgaacctgagaaatcatgt
ctgagatctcctcaggagttgcagagtaggcaaatcagaagctgcacgaaggttcacatg
caagggattgcggttggtagagctgttgatttgacacggtttgaatgttatgaggacctg
ctgaggaagctggaggagatgtttgatattgaaggtgagctcagtggattctcaaagaag
tggcaagttgtctacactgatgatgaagatgatatgatgatggttggagatgatccatgg
catgagttctgcagtatggtgaggaagattttcatatatacatcagaagaagttaagaga
ttatcacccaagagtaaacttccggtcaacgaagagattaaagcagccaaagctgatgat
gacgttgatacaacggttaacatggaagatcgatcctctatcgttggtcctgggtgctaa
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