KEGG   Ricinus communis (castor bean): 8262600
Entry
8262600           CDS       T01087                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03082  ATP-dependent chromatin remodeling
rcu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    8262600
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    8262600
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rcu01009]
    8262600
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcu03021]
    8262600
   03036 Chromosome and associated proteins [BR:rcu03036]
    8262600
Protein phosphatases and associated proteins [BR:rcu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     8262600
Transcription machinery [BR:rcu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     8262600
    SWI/SNF complex
     8262600
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    8262600
   PBAF complex
    8262600
   SWI/SNF complex
    8262600
SSDB
Motif
Pfam: SNF5 Malt_amylase_C
Other DBs
NCBI-GeneID: 8262600
NCBI-ProteinID: XP_002519347
UniProt: B9S028
LinkDB
Position
9:428649..431119
AA seq 241 aa
MKGLPSTSSSKLPVKFRMPTAQNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRT
AKDLKLPPAFVMQIAQSIQTQLSEFRSYEGQDMFTGEKFVPIKLDLRVNRTLIKDQFLWD
LNNFDSDPEDFATTFCKDLGIQDPEVAPAVAFAIREQLYEIATQSVATARESRLTKKGRR
GFEYIPASKAGGTASDLMKLFSNRYSMIRKRKEWDVYEPIVDLLSNEEVEALEAREDRNV
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaagggctgccatcgacgtcgtcttcaaaattacccgtcaagttcaggatgccaact
gctcagaacttggtacccattcgtttggacatagaaattgacggccaccgctttaaagat
gctttcacctggaatccttctgatccggactcagaagtcgtggttttcgctaaaaggact
gccaaagacttgaagctccctcctgctttcgttatgcagattgctcagtctattcagaca
cagttgagtgagtttcgatcctacgaaggccaagatatgttcactggcgagaaatttgtt
ccaatcaagcttgatcttcgggtcaatcgcactcttatcaaagatcagtttttgtgggac
ttgaacaactttgacagtgaccctgaagacttcgctacaaccttttgcaaagatttgggt
attcaagaccctgaagttgcacctgcagttgcctttgcaattagggaacaactttatgag
attgcaactcaaagtgtagctactgcaagagaaagcagattaactaaaaagggccgcagg
ggctttgaatacatccctgccagtaaagccgggggtactgcatcagatttgatgaagtta
ttcagtaatagatacagcatgattaggaaacgaaaggagtgggatgtatatgagcctatt
gttgatctcctatcgaatgaggaagttgaagctcttgaagcaagggaagacaggaatgtg
aggtga

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