Ricinus communis (castor bean): 8262677
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Entry
8262677 CDS
T01087
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8262677
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
8262677
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
8262677
NCBI-ProteinID:
XP_002526780
UniProt:
B9SLB1
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Position
6:28103579..28107705
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AA seq
312 aa
AA seq
DB search
MASLPYADVDFTIRAMAGRAEGFGRLAIGGLHGPVYSVTTLADDGPGSLRDGCRRREPLW
IVFEVSGTIHLNSYLSVSSYKTIDGRGQRIKFTGKGLRLKECEHIIICNLEFESGRGHDV
DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRQSTDITVSRCFFTQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA
GEKKKTFEYYTEKAADKEETKSGLVRSEGDAFLNGAQPCFLTGNGEECVFHPSEYYQTWT
MEAPSDSLKEVI
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcttccgtacgccgatgttgacttcaccattcgagcaatggccggcagagcc
gaggggtttggtcggttggccattggtgggttacatggtccggtttattctgtcaccact
ctggctgatgatggccctggatcactccgtgatggttgcaggagaagagaaccactatgg
attgtttttgaggtttcaggtactattcatcttaactcatacttgagtgtatcgtcttat
aagacaatagatggtagaggccaaagaataaagttcactggcaagggcttaagactaaaa
gaatgtgagcatattatcatctgcaatcttgagtttgaaagtggaagaggacatgatgtt
gatggcattcagataaaaccaaattctaagcacatttggatagatcgctgcagcctccgt
gactatgatgatggacttattgatatcacaagacaaagcaccgatattactgtttctaga
tgtttcttcactcagcatgataagacaatgcttattggagcagacccctctcatgttggc
gacagatgcatccgggtgaccattcatcattgtttctttgatggaacgcggcaaaggcat
ccccgtcttagatttggaaaagttcatctgtacaataattacacaagaaattggggaatc
tatgctgtttgtgcaagtgttgaatcccagatttattctcaatgcaatatatatgaagca
ggagagaagaaaaaaacctttgaatattatacagagaaggcagcagacaaggaagagacc
aagtctggcttagtaagatctgaaggagatgcattccttaatggagctcaaccatgcttc
ttaactggcaatggtgaagaatgcgtgttccacccaagtgaatattatcaaacatggaca
atggaagctccctcagattccttgaaagaagttatctga
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