Ricinus communis (castor bean): 8262757
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Entry
8262757 CDS
T01087
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8262757
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
8262757
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
8262757
NCBI-ProteinID:
XP_002521130
UniProt:
B9S561
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Position
7:complement(24538890..24543503)
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AA seq
441 aa
AA seq
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MAVPYSLRRLCICTLIILLLFVTVNASTELNSRLGEKTHFQSSDNSTMADGSGGAWNEHA
VEDPEDIASMVDESIRNSTARRNLGFFSCVTGNPIDDCWRCDPHWQLHRKRLANCGIGFG
RNAVGGRDGRYYVVTDSGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNS
FKTIDARGTNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPTHYGWRTMADG
DAISIFGSSHIWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYTRD
KLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLA
PNNAFAKEVTKRVETSNNVWKHWNWRSEGDLLLNGAYFTPSGAGAAASYARASSLGAKSS
SMVGAITSTAGALVCRRGRQC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcggttccttattcgcttagacgcttatgtatatgtacattgattattctgctcctg
tttgtcactgtaaatgcttcgacagagctgaactcgaggttgggcgaaaagacacatttt
cagagctctgacaactctacaatggcggacgggtcaggtggtgcatggaacgagcatgct
gttgaagatccggaagacatagcatctatggttgatgaaagcatacgcaacagcaccgca
aggaggaatttaggatttttctcatgtgtaactggcaacccaattgatgattgttggaga
tgtgaccctcactggcagctccacaggaagcggctagctaattgtgggattggttttgga
cgtaatgctgttggtggtcgcgatggtagatactatgttgtcaccgactctggtgacgat
gaccctgttaacccaaaacctggcacattacgccatgctgttattcaagatagacctttg
tggattgtattcaagagagacatggtgatcacactcaagcaagagcttattatgaacagt
ttcaagactattgatgcccgtggaactaatgttcacattgccaatggagcttgcattacc
atccaatttgtcacaaatatcattattcacggtctccatatccatgattgcaagcctact
ggtaatgccatggttcgtagctcacccactcattatggatggaggacaatggctgatgga
gatgcgatttctatttttggatctagtcacatttgggtcgatcacaattctctatctaat
tgcgctgatggactcattgatgctataatggggtcaactgccattaccatttccaacaac
tacttcacccaccacaatgaggttatgttattgggtcatagcgactcctatacaagagat
aagctgatgcaagtaacaattgcctacaaccattttggcgagggtcttatccagagaatg
ccaaggtgtaggcatgggtacttccatgtggtgaacaatgactacacacactgggaaatg
tatgccattggtggaagtgccagtcccaccattaatagccaaggaaacagataccttgcc
cctaacaatgcttttgctaaagaggtaactaagagggtcgaaacatcaaataatgtatgg
aagcactggaattggagatcagaaggagacctattgcttaatggagcttacttcactcca
tcaggtgctggagctgcagccagttatgccagagcttcaagcttaggggccaagtcctct
tccatggttggtgccattacttcaaccgctggtgctcttgtctgccgcagaggccgccaa
tgttaa
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