Ricinus communis (castor bean): 8262778
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Entry
8262778 CDS
T01087
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8262778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8262778
03110 Chaperones and folding catalysts [BR:
rcu03110
]
8262778
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8262778
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8262778
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8262778
Messenger RNA biogenesis [BR:
rcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8262778
Chaperones and folding catalysts [BR:
rcu03110
]
Heat shock proteins
HSP60 / Chaperonin
8262778
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8262778
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8262778
Exosomal proteins of other body fluids (saliva and urine)
8262778
Exosomal proteins of breast cancer cells
8262778
Exosomal proteins of colorectal cancer cells
8262778
Exosomal proteins of bladder cancer cells
8262778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8262778
NCBI-ProteinID:
XP_002521151
UniProt:
B9S582
LinkDB
All DBs
Position
7:24383675..24388630
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFVSGLASKARLAKNSTQQVGSRLAWSRSYAAKDIKFGVEARALMLKGVEDLADAVKV
TMGPKGRNVVLEQSWGAPKVTKDGVTVAKSIEFQDRVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAILVEGCKSVAAGMNAMDLRRGISMAVDTVITNLKSRTRMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFVTNTK
NQKCELEDPLILIHEKKISNLNAVVKVLELALKKQRPLLIVAEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKASMQDLAVLTGGQVITEELGMNLEKVGAEAFGSCKKVTVSKDD
TIILDGFGDKKALEERCEQLRSSIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKDLDKLHTANFDQKIGVQIIQNALKM
PVHTIAANAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVTELPKDEKEPTAMAGGGGGMGY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgtctctggactcgcatctaaagccagattggctaagaacagtacccag
caggtgggtagtagattggcttggagcagaagttatgcagctaaagatataaaatttggc
gttgaagctcgcgccttgatgcttaaaggtgttgaggatcttgctgatgctgttaaagtg
acaatgggccctaaagggcggaatgtagttttggagcaaagttggggagcccctaaagtg
acaaaagatggtgttacagtagccaagagcattgaattccaagacagagtgaagaatgtt
ggtgctagcctcgtgaagcaggtcgcaaatgctacaaatgatgtggcaggcgatggaaca
acgtgtgcaacagtcctcactcgtgcaattttagttgaaggatgcaagtctgtggcagct
ggaatgaatgccatggatctaagacgtgggatttcaatggcagttgatactgttatcact
aacttgaagagcagaacaaggatgataagcacatctgaagaaatagcacaggttggaaca
atatcagcaaatggagaaagagagattggtgagctcatagccaaggcaatggagaaagtt
ggaaaagagggtgtcattactatttctgatggaaaaacattgtacaatgagctagaggtt
gtcgagggaatgaagctggacagaggctacatatccccttattttgtcaccaatacaaaa
aaccaaaaatgtgaactagaagatcccctaattttaattcatgagaagaagatctcaaat
ctaaatgctgtagtcaaggttttagaattagctttgaagaagcaaagacctttgctgatt
gttgctgaagatgttgaaagtgaagcactagcaactctcattctaaacaagcttcgtgct
ggaatcaaggtctgtgccataaaagcaccagggtttggagaaaataggaaggccagtatg
caagaccttgccgttctcactggtggtcaggttataactgaggagcttggtatgaacctt
gaaaaggtgggagcagaggcatttggctcatgcaaaaaggttacagtatccaaggatgac
acaattattcttgatggatttggtgataagaaagccttggaagaaagatgtgagcagttg
aggtcttcaatcgaattgagcacttctgattatgacaaggaaaaattgcaagagcggctt
gcgaagctttctggtggtgttgcagttctgaagattggtggggctagtgaagcagaagtt
agtgaaaagaaagacagagttactgatgctctgaatgccaccaaggcggctgtggaggaa
ggaattgtacctggtggtggggttgcacttctttatgcatctaaagatttggacaagttg
catactgcaaactttgaccagaagattggtgtccagattatccagaatgctcttaagatg
ccggtacacactattgctgcaaatgcaggagtagagggggcagttgttgttggcaagcta
ttagagcaggataatcctgatcttggatacgatgcagctaaaggggaatacgtggatatg
gtaaagtcaggaattattgatccactgaaagtcattagaacagccttggtagatgccgca
agtgtctcttcattgatgactacaactgaggccattgtgacggaactacccaaggacgag
aaggaacccaccgccatggccggtggtggtggtggcatgggctattaa
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