Ricinus communis (castor bean): 8262781
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Entry
8262781 CDS
T01087
Name
(RefSeq) CLIP-associated protein isoform X2
KO
K16578
CLIP-associating protein 1/2
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8262781
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rcu04812
]
8262781
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
8262781
Cytoskeleton proteins [BR:
rcu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
8262781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
Adaptin_N
Cnd1
PDS5
INTS1_R4
Tti2
UTP20
MMS19_C
HEAT_DAAF5
RRP12_HEAT
Dopey_N
DUF7217
Npa1
SEN1_N
Motif
Other DBs
NCBI-GeneID:
8262781
NCBI-ProteinID:
XP_015575957
LinkDB
All DBs
Position
7:24348084..24363001
Genome browser
AA seq
1446 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLYQLLEASRKSLSSTETTSLVDCCLDLLKDNNFKVSQG
ALMALASAAVLSGEHFKLHFNGLVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWMHKSWRVREEFARTVTSAIGLFSSTELPLQRAILPPILQMLNDPNPGVREAAI
LCIEEMYSQAGPQFRDELQRHHLPMSMMKDINARLEKIEPQMRPSDGPTGNFATGEMKPM
NLNPKRSSPKAKSTTREVSLFGGESDVTEKPIEPVKVYSEKELIREFEKVASTLVPEKDW
SIRIAAMQRIEGLVLGGAADYPCFRGLLKQLVSPLSTQLSDRRSSIVKQACHLLCFLSKE
LLGDFEGCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVGRVLLRIADCAKNDRS
AILRARCCEYALLILEHWPDAPEIQRSADLYEDMIRCCVADAMSEVRSTARMCYRMFAKT
WPERSRRLFSSFDPVIQRIINEEDGGLHRRHASPSLRDRSAQLSFTSQASAPSILPGYGT
SAIVAMDRTSSLSSGTSLSSGLLSQTKGLGKGTERSLESVLHASKQKVTAIESMLRGLEL
SDKQNHSTLRSSSLDLGVDPPSSRDPPFPATVPASNHLTSSLSLESTTTSISKGSNRNGG
LVLSDIITQIQASKDSAKLSYQSTAAAESLPAFSSYTAKRASERLHERSSFEENNDIREA
RRFAHSHTDRQYIDLPYKDVNYRDSHNSHIPNFQRPLLRKHAAGRMSAGRRRSFDDSQLS
LGEMSNYVEGPASLADALSEGLSPSSDWNARVAAFNYLRSLLQQGPKGIQEVVQNFEKVM
KLFFQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCS
TTLEIVSKTYSVDTLLPALLRSLDEQRSPKAKLAVIEFAITSFNKHAMNSEGSSNTGILK
LWLAKLTPLAHDKNTKLKEAAISCIISVYSHFDPTAVLNFILSLSVEEQNSLRRALKQYT
PRIEVDLMNFLQSKKERQRSKSSYDPSDVVGTSSEEGYVGLPKKSHFFGRYSAGSIDSES
GRKWSSTQESTLITGSIGNAASDETQENLYQNLENITNVEVHSSKTRDLTYLVNSTTPNI
VSRVGRLENVDHSLNLEGLSTPCLDNNGLMTSELMVDAESFGQDNDASINMELNQHKPAA
VRINSLPDSGPSIPQILHLVCNGNDESPTASKRGALQQLIEASMANEHSVWSKYFNQILT
AVLEVLDDAESSIRELALSLIIEMLKNQKDAVEDSIEVVIEKLLHVTKDVVPKVSNEAEH
CLSIVLSQYDPFRCLSVVVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMTQLPSFLPAL
FEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLRLVTIYANRISQARTGTA
IEASHD
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgttagaactggcgcgtgcaaaagacacaaaggagagaatggcaggagta
gagagactgtatcaactactagaagcatctagaaagagtttgagttcaacagaaacgaca
tcgcttgttgattgctgtttggatcttttaaaagataataattttaaagtatctcagggt
gctttaatggctttagcatctgctgctgttttgtctggtgaacatttcaagttgcatttc
aacggtcttgttcctgctgttgttgaacgcttaggtgatgctaaacaaccagtgagagat
gctgctagacgcctcttgttaactttgatggaggtatcttcaccaacaatcattgttgag
agagctggctcctatgcctggatgcacaagagctggcgtgttcgagaagaatttgctagg
actgtcacatcagccattggtcttttttcttctactgagcttcctcttcagcgagctata
ctccctcctattttgcagatgttaaatgacccaaatcctggtgtcagggaagctgctatc
ttgtgcattgaggagatgtattcgcaggcagggcctcagtttcgcgatgagcttcagcgt
catcaccttcctatgtctatgatgaaagatattaatgctaggctagagaagattgaacct
caaatgcgcccttcggatggacctactggaaattttgctactggagagatgaagcctatg
aaccttaaccccaaaaggagtagtccaaaggccaagagtaccacaagagaggtgtctctt
tttggaggagaaagtgatgtcacagagaaacccatagagccagttaaggtttactcagaa
aaagagctaattagggagtttgagaaagtcgcttctacccttgttccagaaaaggattgg
tctatccgcattgctgccatgcagagaattgaagggcttgttttaggaggtgctgctgat
tacccatgttttcggggacttctgaagcaacttgttagccccttaagcacacaattatct
gatcggaggtcaagcatagtgaagcaggcttgccatctattgtgctttttgtcgaaggaa
ctcttgggcgattttgagggatgtgctgagatgtttattcctgtccttttcaagctggtt
gtgattactgtacttgtaattgcagagtctgcagataactgcataaaaacgatgttgcgc
aactgcaaagttggccgtgtgcttcttcgcatagctgattgtgcaaagaatgatcgaagt
gcgatacttcgggcaagatgctgtgaatatgctctattgattctagaacactggcctgat
gctccagaaatacaaaggtcggctgatctttatgaagatatgataaggtgttgcgttgca
gatgctatgagtgaggtaagatcaactgcaagaatgtgctacagaatgtttgcaaaaacc
tggccagagcgttcccgccgcttattttcatcttttgatcctgttattcaacggattatt
aatgaagaggatgggggcttgcataggcgacatgcttctccttctctccgagatagaagt
gcacaattgtcatttacttcgcaagcatctgctccttcaatcttgcctggatatggaacc
tctgcaattgttgccatggatagaacatcaagcttgtcctctgggacatctctgtcttct
ggcctgctgtctcaaacaaagggacttggtaaaggtactgagcgtagtttggagagtgta
ctgcatgcaagcaaacagaaggtcactgcgattgagagcatgcttagaggtctggaatta
tctgacaaacagaatcattcaactctgcggtcgtctagtttggatctaggagttgaccct
ccatcatctcgtgatccaccattcccggctactgttccagcctctaatcatctcacaagc
tccttaagtttggaatcaactacaactagcatcagcaaaggtagtaaccgcaatggtggc
ttggtgttatctgatattattacacaaattcaggcttctaaagattctgctaaattatca
tatcaaagtactgcggcagctgaatctctgccagcattttcatcatacacggctaagagg
gcttctgaaagactccacgaaagaagttcctttgaagagaacaatgacattagggaggct
aggcgttttgcacattcacacactgacaggcagtatattgatttgccttacaaagatgta
aactaccgggattctcataacagtcacattcccaatttccagaggccacttttacgaaag
catgcagctggacgaatgtctgctgggaggaggaggagtttcgatgacagccaactatct
cttggtgagatgtcaaattatgtggaaggtcctgcatctctcgctgatgcactgagtgaa
ggacttagtccaagttctgactggaatgctagggttgctgcttttaattacctccggtca
ttgctgcagcaaggccctaaaggtattcaggaagtagtccagaattttgagaaggtaatg
aagttgtttttccagcacttagatgacccccaccacaaagttgcacaagcggccctttca
acacttgcagatattattccctcttgccgaaagcccttcgaaagttacatggaaaggatc
ttgccccatgttttttcacgtttaattgaccccaaagaactagtcaggcaaccttgctca
actactctggaaattgttagcaaaacttatagtgttgatactctcttacccgcattgctt
cgctcactagatgaacagcgatctccaaaggctaaattggctgttattgagtttgctatt
acttcctttaacaagcatgctatgaactctgaaggttctagtaatacaggcattctaaaa
ttgtggttggctaagttgactccactagcccatgacaaaaatactaagctcaaggaggcg
gctatttcatgcattatttcagtttactcccacttcgatccaacagctgttcttaatttt
attcttagcctgtcagttgaagaacagaattccttgagacgtgctcttaaacagtatact
cctcgtattgaagtggatctgatgaactttttgcaaagtaagaaagagcgacagcggtct
aagtcttcttatgacccttctgatgttgttggaacatcttcagaggaaggatatgttggg
ttgccaaaaaagagtcatttctttggaaggtactctgctggttccattgacagtgaaagt
ggcaggaagtggagttctacccaagaatcaaccttgataactggaagtattggtaatgca
gcttctgatgaaactcaggagaacttgtatcagaatcttgagaacattactaatgttgaa
gttcatagttcaaagactagggatttgacctatttggtcaattccaccacaccgaacata
gtatcccgtgttggccgtcttgaaaatgtggaccatagcttaaatttggaggggttatct
actccttgtctagataacaatgggctgatgacttctgaactcatggtggatgctgaaagc
tttgggcaagataatgatgcttcaattaacatggaacttaaccaacataaacctgcagct
gtaagaatcaactcattgccagattcaggtcctagcattccccaaattcttcacctggtt
tgcaatggtaacgatgagagtcctacagcaagtaagcgtggtgcacttcagcagttaatt
gaagcatctatggctaatgaacattctgtatggtctaaatatttcaatcaaattttgaca
gctgtacttgaggtgttggatgatgctgagtcctcaatccgggaacttgctctttcattg
attattgaaatgctcaaaaaccaaaaagatgcggtggaagattccatagaggttgtaatt
gagaagttgcttcacgttacgaaggatgttgttccaaaagtttctaatgaagctgagcac
tgcttgagcattgttttgtctcagtatgatccattcagatgtttgagtgtagttgttcct
ttattggttactgaagatgagaaaactcttgtgacatgcataaactgtttaacaaagctt
gtgggccggctctcgcaggaggaactaatgactcagctaccatcattcttgcctgccctt
tttgaagcttttggaaaccagagtgcagatgttcgtaagactgttgttttctgcctggtg
gatatttatattatgcttgggaaagcatttttgccgtacttggaggggcttaacagtaca
cagttgcggttggtaaccatttatgccaatcggatatcgcaggccagaacaggtactgca
atagaagctagccatgattag
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