Ricinus communis (castor bean): 8262820
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Entry
8262820 CDS
T01087
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8262820
09122 Translation
03015 mRNA surveillance pathway
8262820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8262820
Spliceosome [BR:
rcu03041
]
Complex A
Other components
Complex A specific factors
8262820
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
8262820
NCBI-ProteinID:
XP_015576029
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All DBs
Position
2:17098682..17103236
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AA seq
449 aa
AA seq
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MSGMYAQDGESAPPSYGGGGGTGGYGGGGNGGGGGGGGGYGGDVGYGGRGGRAGGGGGGR
GYGSNSHNRGGYQGGDRGGRGGGSGGRGGGRGGSGRDGDWLCPNPSCGNLNFARRVECNK
CGTPSPAGANNDRGNGGGYSKGGSGGTRGGRGGNYDGNRTSNYNDGGRGGGYDNRSGGGN
RGSSYGRDNGGGYSQVPPSAVPSYGGSGVNYPPPPSSYGGNSNYGMEAVPHPPSYTGGPT
SYPPSYGGAPVSGYNDVTVDIRSGGRGGPPGGYGAGAPRYEGVSGYSGASADAPAKIKQC
DGNCDDTCDNSRIYISNLPPDVTTDELRELFGGIGQVGRIKQKRGYKDQWPWNIKLYTDE
KGNNKGDAVLSYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKTAPRQPSYDHGGGRGGYG
GGDRRRENNRDGGSGPDRHYHGGNRSRPY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggatgtacgctcaagacggcgaatctgcccctccatcttacggcggtgggggt
ggcaccggtgggtatggaggtgggggaaacggtgggggcgggggcgggggcgggggctac
ggaggtgatgttggttatggtggccgtggaggtcgagctggaggtggcggtggcggaaga
ggatatgggagtaactcgcataatcgcggaggatatcaaggaggagaccgtggtggaaga
ggcggcggaagtggtggaagaggaggtggccgaggtggtagcggaagagatggtgattgg
ctgtgccctaaccctagctgtggcaatttgaactttgcaagaagagttgagtgtaacaaa
tgcgggactccctcccctgctggtgctaacaatgaccgtggaaatggtggaggttatagc
aagggaggaagtggtggcacccgaggaggtagaggtggtaactatgatggtaataggacc
agcaattacaatgatgggggcagaggtggtggctatgataataggagtggtggcggcaat
aggggcagctcatatggaagagacaacggtggtggttacagccaggtgcctccatccgca
gtcccatcctatggtggttctggagttaattatccccctccacctagctcatatggcggc
aattcaaattatggaatggaagcagttcctcatcctccaagttacactggtggacctaca
tcttacccaccatcttatggtggtgctcctgtgagtggttacaatgatgttacagttgat
ataagaagtggcggacgaggtggcccacctggtggatatggtgctggtgctccacgttat
gaaggagtcagtgggtatagtggtgcttctgctgatgccccagctaaaattaagcagtgt
gacggaaattgcgatgatacttgtgataactcaagaatttacatatcaaatctgcctcct
gatgtgactactgacgaattgagagaactttttgggggcattggacaagttggaaggatt
aagcagaagcgtggctataaagatcagtggccgtggaatataaaattatacacagatgag
aagggaaacaacaaaggcgatgcagttttgtcttatgaagatccatctgctgcgcattct
gctggcggtttttacaataattatgatatgagaggttataagatcaatgttgcgatggca
gaaaagacagcaccaaggcagccttcatatgaccatggaggtggtagaggtggctatggt
ggaggtgatcggcgcagggagaataacagagatggaggttccggccctgataggcattac
cacggtggaaaccgttcacgcccgtactga
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